Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC092053.3-201ENST00000641308 4975 ntBASIC15.16■□□□□ 0.02
RFX6Q8HWS3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 AL136309.1-201ENST00000403917 691 ntBASIC15.16■□□□□ 0.02
RFX6Q8HWS3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 AC027601.3-201ENST00000622907 509 ntBASIC15.16■□□□□ 0.02
RFX6Q8HWS3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RFX6Q8HWS3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 AC006001.1-201ENST00000325130 474 ntBASIC15.15■□□□□ 0.02
RFX6Q8HWS3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 NME2P1-201ENST00000426182 414 ntBASIC15.15■□□□□ 0.02
RFX6Q8HWS3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 PPY2P-201ENST00000582808 702 ntBASIC15.15■□□□□ 0.02
RFX6Q8HWS3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 AL136301.1-201ENST00000615830 422 ntBASIC15.15■□□□□ 0.02
RFX6Q8HWS3 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFX6Q8HWS3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
RFX6Q8HWS3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.14■□□□□ 0.01
RFX6Q8HWS3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFX6Q8HWS3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFX6Q8HWS3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms