Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VRK2Q86Y07 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.47□□□□□ -0.25
VRK2Q86Y07 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 AL022313.4-201ENST00000562756 2046 ntBASIC13.46□□□□□ -0.25
VRK2Q86Y07 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.46□□□□□ -0.25
VRK2Q86Y07 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 AL035414.1-201ENST00000451327 857 ntBASIC13.46□□□□□ -0.25
VRK2Q86Y07 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 PPY2P-201ENST00000582808 702 ntBASIC13.46□□□□□ -0.25
VRK2Q86Y07 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 AL136301.1-201ENST00000615830 422 ntBASIC13.46□□□□□ -0.25
VRK2Q86Y07 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 AC023794.5-201ENST00000564380 2157 ntBASIC13.46□□□□□ -0.25
VRK2Q86Y07 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK2Q86Y07 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.46□□□□□ -0.25
VRK2Q86Y07 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
VRK2Q86Y07 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
VRK2Q86Y07 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VRK2Q86Y07 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
VRK2Q86Y07 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VRK2Q86Y07 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.46□□□□□ -0.26
VRK2Q86Y07 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.46□□□□□ -0.26
VRK2Q86Y07 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VRK2Q86Y07 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VRK2Q86Y07 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
VRK2Q86Y07 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VRK2Q86Y07 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
VRK2Q86Y07 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VRK2Q86Y07 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VRK2Q86Y07 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VRK2Q86Y07 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK2Q86Y07 NME2P1-201ENST00000426182 414 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms