Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 NOC2LP1-201ENST00000450578 752 ntBASIC16.17■□□□□ 0.18
TRIM50Q86XT4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 RN7SL555P-201ENST00000584742 339 ntBASIC16.17■□□□□ 0.18
TRIM50Q86XT4 AC138894.2-201ENST00000602838 371 ntBASIC16.17■□□□□ 0.18
TRIM50Q86XT4 AC051619.9-201ENST00000623237 597 ntBASIC16.17■□□□□ 0.18
TRIM50Q86XT4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.17■□□□□ 0.18
TRIM50Q86XT4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 BANF1P3-201ENST00000412556 261 ntBASIC16.16■□□□□ 0.18
TRIM50Q86XT4 RPSAP15-201ENST00000448168 861 ntBASIC16.16■□□□□ 0.18
TRIM50Q86XT4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 AP000358.1-201ENST00000456260 156 ntBASIC16.16■□□□□ 0.18
TRIM50Q86XT4 RN7SL181P-201ENST00000462921 277 ntBASIC16.16■□□□□ 0.18
TRIM50Q86XT4 NDUFS6P1-201ENST00000485187 316 ntBASIC16.16■□□□□ 0.18
TRIM50Q86XT4 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 IQSEC3P1-201ENST00000538799 536 ntBASIC16.16■□□□□ 0.18
TRIM50Q86XT4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 AC092978.1-202ENST00000637590 1327 ntBASIC16.16■□□□□ 0.18
TRIM50Q86XT4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM50Q86XT4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRIM50Q86XT4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms