Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RPSAP12-201ENST00000435879 888 ntBASIC11.69□□□□□ -0.54
VPS13CQ709C8 ASS1P2-201ENST00000439895 1223 ntBASIC11.69□□□□□ -0.54
VPS13CQ709C8 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 AC113935.1-201ENST00000471722 555 ntBASIC11.69□□□□□ -0.54
VPS13CQ709C8 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13CQ709C8 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13CQ709C8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13CQ709C8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13CQ709C8 FAM226B-201ENST00000602508 1490 ntBASIC11.69□□□□□ -0.54
VPS13CQ709C8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13CQ709C8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13CQ709C8 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 JPT2-203ENST00000382711 894 ntTSL 4 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 ALG1L15P-201ENST00000482834 794 ntBASIC11.69□□□□□ -0.54
VPS13CQ709C8 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 RNA5SP420-201ENST00000516997 137 ntBASIC11.69□□□□□ -0.54
VPS13CQ709C8 CASP3-205ENST00000517513 964 ntTSL 5 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13CQ709C8 NF1P11-201ENST00000621292 1282 ntBASIC11.69□□□□□ -0.54
VPS13CQ709C8 AL357143.1-203ENST00000639750 881 ntBASIC11.69□□□□□ -0.54
VPS13CQ709C8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 ZNF436-AS1-201ENST00000335648 2547 ntBASIC11.68□□□□□ -0.54
VPS13CQ709C8 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 KRT8P6-201ENST00000399259 1207 ntBASIC11.68□□□□□ -0.54
VPS13CQ709C8 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 AC026412.1-206ENST00000502273 206 ntBASIC11.68□□□□□ -0.54
VPS13CQ709C8 AC079414.2-201ENST00000567157 1104 ntBASIC11.68□□□□□ -0.54
VPS13CQ709C8 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 AL161932.2-201ENST00000435436 679 ntBASIC11.68□□□□□ -0.54
VPS13CQ709C8 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 HLF-202ENST00000430986 1385 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13CQ709C8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13CQ709C8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13CQ709C8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC11.67□□□□□ -0.54
VPS13CQ709C8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13CQ709C8 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13CQ709C8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
VPS13CQ709C8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
VPS13CQ709C8 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13CQ709C8 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
VPS13CQ709C8 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC11.67□□□□□ -0.54
VPS13CQ709C8 NALT1-202ENST00000450304 437 ntTSL 3 BASIC11.67□□□□□ -0.54
VPS13CQ709C8 URAHP-205ENST00000610227 398 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms