Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 AL157996.1-201ENST00000624684 2299 ntBASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 AC002056.1-201ENST00000395613 760 ntBASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 RPL13AP23-201ENST00000480739 586 ntBASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 AC112191.1-201ENST00000523689 701 ntBASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 CD63-204ENST00000546939 779 ntTSL 3 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 SLC25A6P4-201ENST00000586535 553 ntBASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 AL049840.3-201ENST00000602669 611 ntBASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 AC064836.3-201ENST00000607928 673 ntBASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 HSPA8P5-201ENST00000456928 2069 ntBASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 FTO-214ENST00000636218 2227 ntTSL 5 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KCNIP4Q6PIL6 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 MED15P5-201ENST00000423150 992 ntBASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KCNIP4Q6PIL6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms