Protein–RNA interactions for Protein: Q3SY56

SP6, Transcription factor Sp6, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP6Q3SY56 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.11□□□□□ -0.47
SP6Q3SY56 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.11□□□□□ -0.47
SP6Q3SY56 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.11□□□□□ -0.47
SP6Q3SY56 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 RNU1-114P-201ENST00000365297 166 ntBASIC12.11□□□□□ -0.47
SP6Q3SY56 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.11□□□□□ -0.47
SP6Q3SY56 RPSAP43-201ENST00000402237 625 ntBASIC12.11□□□□□ -0.47
SP6Q3SY56 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.11□□□□□ -0.47
SP6Q3SY56 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.11□□□□□ -0.47
SP6Q3SY56 KLF2P3-201ENST00000451977 1087 ntBASIC12.11□□□□□ -0.47
SP6Q3SY56 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.11□□□□□ -0.47
SP6Q3SY56 HLA-J-203ENST00000494367 1087 ntBASIC12.11□□□□□ -0.47
SP6Q3SY56 AC131206.1-201ENST00000538078 1211 ntBASIC12.11□□□□□ -0.47
SP6Q3SY56 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.11□□□□□ -0.47
SP6Q3SY56 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.11□□□□□ -0.47
SP6Q3SY56 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.11□□□□□ -0.47
SP6Q3SY56 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.11□□□□□ -0.47
SP6Q3SY56 SRD5A3P1-201ENST00000603021 949 ntBASIC12.11□□□□□ -0.47
SP6Q3SY56 AC027612.4-201ENST00000605371 583 ntBASIC12.11□□□□□ -0.47
SP6Q3SY56 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SP6Q3SY56 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SP6Q3SY56 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.11□□□□□ -0.47
SP6Q3SY56 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SP6Q3SY56 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.11□□□□□ -0.47
SP6Q3SY56 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.11□□□□□ -0.47
SP6Q3SY56 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
SP6Q3SY56 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SP6Q3SY56 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 AC100757.3-201ENST00000622361 1406 ntBASIC12.11□□□□□ -0.47
SP6Q3SY56 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SP6Q3SY56 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 PCDHA6-201ENST00000378126 3267 ntBASIC12.1□□□□□ -0.47
SP6Q3SY56 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SP6Q3SY56 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.1□□□□□ -0.47
SP6Q3SY56 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.1□□□□□ -0.47
SP6Q3SY56 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SP6Q3SY56 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SP6Q3SY56 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.1□□□□□ -0.47
SP6Q3SY56 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SP6Q3SY56 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.1□□□□□ -0.47
SP6Q3SY56 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 AC092580.3-201ENST00000430932 139 ntBASIC12.1□□□□□ -0.47
SP6Q3SY56 RN7SL399P-201ENST00000471648 279 ntBASIC12.1□□□□□ -0.47
SP6Q3SY56 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SP6Q3SY56 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 AP001582.1-201ENST00000525856 295 ntBASIC12.1□□□□□ -0.47
SP6Q3SY56 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
SP6Q3SY56 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.1□□□□□ -0.47
SP6Q3SY56 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SP6Q3SY56 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.1□□□□□ -0.47
SP6Q3SY56 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.1□□□□□ -0.47
SP6Q3SY56 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 AL590560.3-201ENST00000623350 461 ntBASIC12.1□□□□□ -0.47
SP6Q3SY56 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.1□□□□□ -0.47
SP6Q3SY56 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.1□□□□□ -0.47
SP6Q3SY56 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 NCLP1-201ENST00000445357 1963 ntBASIC12.1□□□□□ -0.47
SP6Q3SY56 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
SP6Q3SY56 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SP6Q3SY56 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.1□□□□□ -0.47
SP6Q3SY56 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SP6Q3SY56 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.1□□□□□ -0.47
SP6Q3SY56 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SP6Q3SY56 TUBB8P4-201ENST00000511806 1324 ntBASIC12.1□□□□□ -0.47
SP6Q3SY56 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.1□□□□□ -0.47
SP6Q3SY56 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms