Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.57□□□□□ -0.24
CD47Q08722 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.57□□□□□ -0.24
CD47Q08722 KRT8P35-201ENST00000483942 1338 ntBASIC13.57□□□□□ -0.24
CD47Q08722 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.57□□□□□ -0.24
CD47Q08722 AL031595.1-201ENST00000623969 4709 ntBASIC13.57□□□□□ -0.24
CD47Q08722 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CD47Q08722 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.57□□□□□ -0.24
CD47Q08722 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CD47Q08722 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
CD47Q08722 SLC7A15P-201ENST00000424028 1363 ntBASIC13.57□□□□□ -0.24
CD47Q08722 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.57□□□□□ -0.24
CD47Q08722 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CD47Q08722 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.56□□□□□ -0.24
CD47Q08722 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CD47Q08722 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.56□□□□□ -0.24
CD47Q08722 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CD47Q08722 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CD47Q08722 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CD47Q08722 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.56□□□□□ -0.24
CD47Q08722 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.56□□□□□ -0.24
CD47Q08722 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.56□□□□□ -0.24
CD47Q08722 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.56□□□□□ -0.24
CD47Q08722 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.56□□□□□ -0.24
CD47Q08722 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.56□□□□□ -0.24
CD47Q08722 SERBP1P5-201ENST00000510079 1181 ntBASIC13.56□□□□□ -0.24
CD47Q08722 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
CD47Q08722 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.56□□□□□ -0.24
CD47Q08722 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.56□□□□□ -0.24
CD47Q08722 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.56□□□□□ -0.24
CD47Q08722 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.56□□□□□ -0.24
CD47Q08722 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.56□□□□□ -0.24
CD47Q08722 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.56□□□□□ -0.24
CD47Q08722 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.56□□□□□ -0.24
CD47Q08722 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.56□□□□□ -0.24
CD47Q08722 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.56□□□□□ -0.24
CD47Q08722 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.56□□□□□ -0.24
CD47Q08722 AL132655.2-201ENST00000596276 594 ntBASIC13.56□□□□□ -0.24
CD47Q08722 AC093726.1-201ENST00000608064 963 ntBASIC13.56□□□□□ -0.24
CD47Q08722 AL662799.1-202ENST00000614205 422 ntBASIC13.56□□□□□ -0.24
CD47Q08722 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.56□□□□□ -0.24
CD47Q08722 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.56□□□□□ -0.24
CD47Q08722 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CD47Q08722 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CD47Q08722 AC093525.8-201ENST00000624099 1342 ntBASIC13.56□□□□□ -0.24
CD47Q08722 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CD47Q08722 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CD47Q08722 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD47Q08722 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CD47Q08722 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 KHSRPP1-201ENST00000427983 1768 ntBASIC13.55□□□□□ -0.24
CD47Q08722 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CD47Q08722 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.55□□□□□ -0.24
CD47Q08722 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CD47Q08722 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.55□□□□□ -0.24
CD47Q08722 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.55□□□□□ -0.24
CD47Q08722 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CD47Q08722 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CD47Q08722 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.55□□□□□ -0.24
CD47Q08722 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD47Q08722 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms