Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TPM4P67936 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TPM4P67936 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC16.37■□□□□ 0.21
TPM4P67936 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TPM4P67936 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TPM4P67936 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC16.37■□□□□ 0.21
TPM4P67936 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 AL139385.1-201ENST00000611744 3272 ntBASIC16.37■□□□□ 0.21
TPM4P67936 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 KHSRPP1-201ENST00000427983 1768 ntBASIC16.37■□□□□ 0.21
TPM4P67936 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TPM4P67936 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TPM4P67936 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 GCOM2-201ENST00000509133 1104 ntBASIC16.37■□□□□ 0.21
TPM4P67936 TPRX2P-201ENST00000535362 881 ntBASIC16.37■□□□□ 0.21
TPM4P67936 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.37■□□□□ 0.21
TPM4P67936 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.37■□□□□ 0.21
TPM4P67936 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.37■□□□□ 0.21
TPM4P67936 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.37■□□□□ 0.21
TPM4P67936 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.37■□□□□ 0.21
TPM4P67936 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.37■□□□□ 0.21
TPM4P67936 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TPM4P67936 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TPM4P67936 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TPM4P67936 HAL-202ENST00000538703 2637 ntTSL 2 BASIC16.37■□□□□ 0.21
TPM4P67936 AL138725.1-201ENST00000407347 1314 ntBASIC16.37■□□□□ 0.21
TPM4P67936 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC16.37■□□□□ 0.21
TPM4P67936 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC16.37■□□□□ 0.21
TPM4P67936 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC16.37■□□□□ 0.21
TPM4P67936 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPM4P67936 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TPM4P67936 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TPM4P67936 AL157996.1-201ENST00000624684 2299 ntBASIC16.36■□□□□ 0.21
TPM4P67936 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM4P67936 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM4P67936 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.36■□□□□ 0.21
TPM4P67936 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TPM4P67936 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM4P67936 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM4P67936 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM4P67936 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM4P67936 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM4P67936 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM4P67936 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM4P67936 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM4P67936 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM4P67936 C1QBPP1-201ENST00000400117 770 ntBASIC16.36■□□□□ 0.21
TPM4P67936 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM4P67936 MEP1AP4-201ENST00000423244 1087 ntBASIC16.36■□□□□ 0.21
TPM4P67936 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM4P67936 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM4P67936 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.36■□□□□ 0.21
TPM4P67936 FAM86GP-201ENST00000448322 971 ntBASIC16.36■□□□□ 0.21
TPM4P67936 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM4P67936 SPDYE18-201ENST00000510091 1050 ntBASIC16.36■□□□□ 0.21
TPM4P67936 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TPM4P67936 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM4P67936 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM4P67936 BRI3BPP1-201ENST00000594224 787 ntBASIC16.36■□□□□ 0.21
TPM4P67936 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM4P67936 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM4P67936 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM4P67936 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM4P67936 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM4P67936 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM4P67936 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM4P67936 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM4P67936 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM4P67936 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM4P67936 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TPM4P67936 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TPM4P67936 TP73-207ENST00000378290 1831 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM4P67936 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM4P67936 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 AC139712.1-201ENST00000378256 1875 ntBASIC16.35■□□□□ 0.21
TPM4P67936 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TPM4P67936 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
TPM4P67936 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM4P67936 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM4P67936 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM4P67936 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms