Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 LINC00567-201ENST00000569854 3409 ntBASIC10.33□□□□□ -0.76
RPL39P62891 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
RPL39P62891 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
RPL39P62891 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
RPL39P62891 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
RPL39P62891 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
RPL39P62891 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC10.33□□□□□ -0.76
RPL39P62891 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
RPL39P62891 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RPL39P62891 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
RPL39P62891 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
RPL39P62891 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 TNRC18P1-201ENST00000502875 3650 ntBASIC10.32□□□□□ -0.76
RPL39P62891 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC10.32□□□□□ -0.76
RPL39P62891 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC10.32□□□□□ -0.76
RPL39P62891 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 MPV17-208ENST00000405076 603 ntTSL 5 BASIC10.32□□□□□ -0.76
RPL39P62891 AL139094.1-201ENST00000405549 1188 ntBASIC10.32□□□□□ -0.76
RPL39P62891 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC10.32□□□□□ -0.76
RPL39P62891 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC10.32□□□□□ -0.76
RPL39P62891 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC10.32□□□□□ -0.76
RPL39P62891 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC10.32□□□□□ -0.76
RPL39P62891 AC022616.1-201ENST00000518688 554 ntBASIC10.32□□□□□ -0.76
RPL39P62891 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC10.32□□□□□ -0.76
RPL39P62891 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 RAB35-202ENST00000534951 939 ntTSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 AC092337.1-201ENST00000568699 1129 ntBASIC10.32□□□□□ -0.76
RPL39P62891 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC10.32□□□□□ -0.76
RPL39P62891 AL049840.4-201ENST00000602422 811 ntBASIC10.32□□□□□ -0.76
RPL39P62891 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC10.32□□□□□ -0.76
RPL39P62891 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
RPL39P62891 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
RPL39P62891 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC10.32□□□□□ -0.76
RPL39P62891 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
RPL39P62891 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
RPL39P62891 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPL39P62891 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC10.32□□□□□ -0.76
RPL39P62891 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
RPL39P62891 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC10.31□□□□□ -0.76
RPL39P62891 AC135782.3-201ENST00000562782 2105 ntBASIC10.31□□□□□ -0.76
RPL39P62891 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
RPL39P62891 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPL39P62891 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
RPL39P62891 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms