Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.28□□□□□ -0.28
CXCR4P61073 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.28□□□□□ -0.28
CXCR4P61073 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CXCR4P61073 PCDHA5-203ENST00000614258 4248 ntBASIC13.28□□□□□ -0.28
CXCR4P61073 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.28□□□□□ -0.28
CXCR4P61073 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CXCR4P61073 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.28□□□□□ -0.28
CXCR4P61073 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 MIR943-201ENST00000401286 94 ntBASIC13.28□□□□□ -0.28
CXCR4P61073 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.28□□□□□ -0.28
CXCR4P61073 TSSK5P-201ENST00000423978 907 ntBASIC13.28□□□□□ -0.28
CXCR4P61073 AK2P2-201ENST00000439142 405 ntBASIC13.28□□□□□ -0.28
CXCR4P61073 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.28□□□□□ -0.28
CXCR4P61073 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.28□□□□□ -0.28
CXCR4P61073 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.28□□□□□ -0.28
CXCR4P61073 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.28□□□□□ -0.28
CXCR4P61073 VDAC1P7-201ENST00000462417 847 ntBASIC13.28□□□□□ -0.28
CXCR4P61073 GCOM2-201ENST00000509133 1104 ntBASIC13.28□□□□□ -0.28
CXCR4P61073 AC022616.1-201ENST00000518688 554 ntBASIC13.28□□□□□ -0.28
CXCR4P61073 AC135586.1-201ENST00000539323 574 ntBASIC13.28□□□□□ -0.28
CXCR4P61073 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.28□□□□□ -0.28
CXCR4P61073 AC009407.1-201ENST00000568958 598 ntBASIC13.28□□□□□ -0.28
CXCR4P61073 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CXCR4P61073 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.28□□□□□ -0.28
CXCR4P61073 AC079781.4-201ENST00000641908 219 ntBASIC13.28□□□□□ -0.28
CXCR4P61073 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CXCR4P61073 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
CXCR4P61073 AC125807.2-201ENST00000513358 3514 ntBASIC13.28□□□□□ -0.28
CXCR4P61073 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.28□□□□□ -0.28
CXCR4P61073 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CXCR4P61073 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CXCR4P61073 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CXCR4P61073 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CXCR4P61073 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.27□□□□□ -0.28
CXCR4P61073 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.27□□□□□ -0.28
CXCR4P61073 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CXCR4P61073 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CXCR4P61073 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CXCR4P61073 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CXCR4P61073 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CXCR4P61073 AL022313.4-201ENST00000562756 2046 ntBASIC13.27□□□□□ -0.28
CXCR4P61073 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CXCR4P61073 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.27□□□□□ -0.28
CXCR4P61073 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CXCR4P61073 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
CXCR4P61073 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CXCR4P61073 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
CXCR4P61073 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CXCR4P61073 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CXCR4P61073 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CXCR4P61073 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CXCR4P61073 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CXCR4P61073 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CXCR4P61073 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CXCR4P61073 USP17L6P-201ENST00000382470 1197 ntBASIC13.27□□□□□ -0.29
CXCR4P61073 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CXCR4P61073 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CXCR4P61073 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CXCR4P61073 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.27□□□□□ -0.29
CXCR4P61073 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.27□□□□□ -0.29
CXCR4P61073 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.27□□□□□ -0.29
CXCR4P61073 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.27□□□□□ -0.29
CXCR4P61073 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.27□□□□□ -0.29
CXCR4P61073 RARRES2P5-201ENST00000564013 466 ntBASIC13.27□□□□□ -0.29
CXCR4P61073 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.27□□□□□ -0.29
CXCR4P61073 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.27□□□□□ -0.29
CXCR4P61073 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.27□□□□□ -0.29
CXCR4P61073 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.27□□□□□ -0.29
CXCR4P61073 BX539320.1-201ENST00000623759 877 ntBASIC13.27□□□□□ -0.29
CXCR4P61073 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CXCR4P61073 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CXCR4P61073 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.27□□□□□ -0.29
CXCR4P61073 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CXCR4P61073 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.27□□□□□ -0.29
CXCR4P61073 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CXCR4P61073 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CXCR4P61073 AL022323.5-201ENST00000624101 2059 ntBASIC13.27□□□□□ -0.29
CXCR4P61073 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CXCR4P61073 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CXCR4P61073 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CXCR4P61073 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CXCR4P61073 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CXCR4P61073 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CXCR4P61073 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms