Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
VSX2P58304 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VSX2P58304 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.96□□□□□ -0.18
VSX2P58304 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VSX2P58304 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.96□□□□□ -0.18
VSX2P58304 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
VSX2P58304 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
VSX2P58304 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VSX2P58304 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
VSX2P58304 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
VSX2P58304 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.18
VSX2P58304 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.96□□□□□ -0.18
VSX2P58304 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.96□□□□□ -0.18
VSX2P58304 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VSX2P58304 AL137784.3-201ENST00000623858 2288 ntBASIC13.95□□□□□ -0.18
VSX2P58304 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 AL390755.1-201ENST00000623716 2027 ntBASIC13.95□□□□□ -0.18
VSX2P58304 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VSX2P58304 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.95□□□□□ -0.18
VSX2P58304 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.95□□□□□ -0.18
VSX2P58304 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VSX2P58304 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.95□□□□□ -0.18
VSX2P58304 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VSX2P58304 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.95□□□□□ -0.18
VSX2P58304 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.95□□□□□ -0.18
VSX2P58304 VDAC1P1-201ENST00000439229 848 ntBASIC13.95□□□□□ -0.18
VSX2P58304 AC022494.1-201ENST00000466044 728 ntBASIC13.95□□□□□ -0.18
VSX2P58304 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 HLA-J-204ENST00000495278 958 ntBASIC13.95□□□□□ -0.18
VSX2P58304 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.95□□□□□ -0.18
VSX2P58304 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.95□□□□□ -0.18
VSX2P58304 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.95□□□□□ -0.18
VSX2P58304 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.95□□□□□ -0.18
VSX2P58304 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.95□□□□□ -0.18
VSX2P58304 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.95□□□□□ -0.18
VSX2P58304 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.95□□□□□ -0.18
VSX2P58304 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.95□□□□□ -0.18
VSX2P58304 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.95□□□□□ -0.18
VSX2P58304 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
VSX2P58304 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.95□□□□□ -0.18
VSX2P58304 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
VSX2P58304 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 AC140479.7-201ENST00000636301 2332 ntBASIC13.95□□□□□ -0.18
VSX2P58304 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VSX2P58304 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
VSX2P58304 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VSX2P58304 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.94□□□□□ -0.18
VSX2P58304 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
VSX2P58304 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
VSX2P58304 LINC00552-201ENST00000625151 2579 ntBASIC13.94□□□□□ -0.18
VSX2P58304 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.94□□□□□ -0.18
VSX2P58304 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.94□□□□□ -0.18
VSX2P58304 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.94□□□□□ -0.18
VSX2P58304 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
VSX2P58304 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
VSX2P58304 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
VSX2P58304 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
VSX2P58304 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VSX2P58304 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.94□□□□□ -0.18
VSX2P58304 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.94□□□□□ -0.18
VSX2P58304 AC016700.1-201ENST00000429424 312 ntBASIC13.94□□□□□ -0.18
VSX2P58304 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms