Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GFRA1P56159 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.97□□□□□ -0.33
GFRA1P56159 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.97□□□□□ -0.33
GFRA1P56159 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
GFRA1P56159 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GFRA1P56159 KRT8P19-201ENST00000551916 1455 ntBASIC12.97□□□□□ -0.33
GFRA1P56159 AL161772.1-201ENST00000610494 4412 ntBASIC12.97□□□□□ -0.33
GFRA1P56159 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GFRA1P56159 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
GFRA1P56159 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GFRA1P56159 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GFRA1P56159 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.96□□□□□ -0.33
GFRA1P56159 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
GFRA1P56159 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.96□□□□□ -0.33
GFRA1P56159 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
GFRA1P56159 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
GFRA1P56159 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.96□□□□□ -0.33
GFRA1P56159 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
GFRA1P56159 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.96□□□□□ -0.33
GFRA1P56159 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 RN7SL530P-201ENST00000485097 298 ntBASIC12.96□□□□□ -0.33
GFRA1P56159 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.96□□□□□ -0.33
GFRA1P56159 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 RHOQP1-201ENST00000555758 579 ntBASIC12.96□□□□□ -0.33
GFRA1P56159 AC026803.1-201ENST00000569130 274 ntBASIC12.96□□□□□ -0.33
GFRA1P56159 PHBP15-201ENST00000574228 665 ntBASIC12.96□□□□□ -0.33
GFRA1P56159 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.96□□□□□ -0.33
GFRA1P56159 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.96□□□□□ -0.33
GFRA1P56159 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.96□□□□□ -0.33
GFRA1P56159 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.96□□□□□ -0.33
GFRA1P56159 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GFRA1P56159 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
GFRA1P56159 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GFRA1P56159 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.96□□□□□ -0.34
GFRA1P56159 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
GFRA1P56159 PCDHA3-202ENST00000532566 4594 ntBASIC12.96□□□□□ -0.34
GFRA1P56159 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.96□□□□□ -0.34
GFRA1P56159 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
GFRA1P56159 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
GFRA1P56159 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
GFRA1P56159 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.96□□□□□ -0.34
GFRA1P56159 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
GFRA1P56159 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.95□□□□□ -0.34
GFRA1P56159 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.95□□□□□ -0.34
GFRA1P56159 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
GFRA1P56159 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.95□□□□□ -0.34
GFRA1P56159 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
GFRA1P56159 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.95□□□□□ -0.34
GFRA1P56159 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
GFRA1P56159 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
GFRA1P56159 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
GFRA1P56159 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.95□□□□□ -0.34
GFRA1P56159 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.95□□□□□ -0.34
GFRA1P56159 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.95□□□□□ -0.34
GFRA1P56159 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.95□□□□□ -0.34
GFRA1P56159 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.95□□□□□ -0.34
GFRA1P56159 DUX4L50-201ENST00000455245 715 ntBASIC12.95□□□□□ -0.34
GFRA1P56159 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.95□□□□□ -0.34
GFRA1P56159 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 AC134698.3-201ENST00000523880 214 ntBASIC12.95□□□□□ -0.34
GFRA1P56159 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.95□□□□□ -0.34
GFRA1P56159 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.95□□□□□ -0.34
GFRA1P56159 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
GFRA1P56159 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.95□□□□□ -0.34
GFRA1P56159 AL109837.1-201ENST00000603272 613 ntBASIC12.95□□□□□ -0.34
GFRA1P56159 LINC01783-202ENST00000614408 828 ntBASIC12.95□□□□□ -0.34
GFRA1P56159 BX284668.2-205ENST00000619677 828 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms