Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CDH12P55289 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH12P55289 AC015909.5-201ENST00000624336 2266 ntBASIC13.61□□□□□ -0.23
CDH12P55289 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.61□□□□□ -0.23
CDH12P55289 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
CDH12P55289 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CDH12P55289 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH12P55289 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CDH12P55289 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CDH12P55289 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH12P55289 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH12P55289 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.61□□□□□ -0.23
CDH12P55289 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH12P55289 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH12P55289 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.61□□□□□ -0.23
CDH12P55289 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.61□□□□□ -0.23
CDH12P55289 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH12P55289 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.61□□□□□ -0.23
CDH12P55289 AC009486.1-201ENST00000569860 813 ntBASIC13.61□□□□□ -0.23
CDH12P55289 MIR497HG-202ENST00000572453 3838 ntBASIC13.61□□□□□ -0.23
CDH12P55289 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.61□□□□□ -0.23
CDH12P55289 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH12P55289 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH12P55289 AGAP10P-201ENST00000454844 2418 ntBASIC13.61□□□□□ -0.23
CDH12P55289 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 AL138725.1-201ENST00000407347 1314 ntBASIC13.61□□□□□ -0.23
CDH12P55289 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CDH12P55289 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CDH12P55289 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH12P55289 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CDH12P55289 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.6□□□□□ -0.23
CDH12P55289 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.6□□□□□ -0.23
CDH12P55289 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CDH12P55289 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CDH12P55289 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CDH12P55289 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CDH12P55289 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.6□□□□□ -0.23
CDH12P55289 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.6□□□□□ -0.23
CDH12P55289 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CDH12P55289 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.6□□□□□ -0.23
CDH12P55289 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 MSTO2P-201ENST00000314835 1709 ntBASIC13.6□□□□□ -0.23
CDH12P55289 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
CDH12P55289 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.6□□□□□ -0.23
CDH12P55289 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.6□□□□□ -0.23
CDH12P55289 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDH12P55289 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms