Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH4P55283 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH4P55283 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH4P55283 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH4P55283 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.8□□□□□ -0.04
CDH4P55283 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CDH4P55283 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH4P55283 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDH4P55283 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH4P55283 AC138627.1-207ENST00000641560 1006 ntBASIC14.8□□□□□ -0.04
CDH4P55283 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH4P55283 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH4P55283 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH4P55283 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH4P55283 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH4P55283 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CDH4P55283 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDH4P55283 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH4P55283 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH4P55283 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.79□□□□□ -0.04
CDH4P55283 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH4P55283 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH4P55283 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CDH4P55283 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH4P55283 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH4P55283 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH4P55283 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH4P55283 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.79□□□□□ -0.04
CDH4P55283 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH4P55283 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH4P55283 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH4P55283 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH4P55283 SLC25A24P2-201ENST00000415059 510 ntBASIC14.79□□□□□ -0.04
CDH4P55283 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH4P55283 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH4P55283 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDH4P55283 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH4P55283 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH4P55283 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH4P55283 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH4P55283 POU5F1P2-201ENST00000521750 823 ntBASIC14.79□□□□□ -0.04
CDH4P55283 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH4P55283 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH4P55283 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH4P55283 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH4P55283 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH4P55283 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH4P55283 AC012617.1-204ENST00000586340 2305 ntBASIC14.79□□□□□ -0.04
CDH4P55283 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH4P55283 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH4P55283 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH4P55283 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH4P55283 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH4P55283 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH4P55283 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH4P55283 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH4P55283 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH4P55283 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDH4P55283 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDH4P55283 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDH4P55283 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH4P55283 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDH4P55283 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH4P55283 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH4P55283 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH4P55283 AC020910.6-201ENST00000623084 1459 ntBASIC14.78□□□□□ -0.04
CDH4P55283 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDH4P55283 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 FRMPD2B-201ENST00000431305 1347 ntBASIC14.78□□□□□ -0.04
CDH4P55283 AL662890.1-201ENST00000396818 632 ntBASIC14.78□□□□□ -0.04
CDH4P55283 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDH4P55283 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.78□□□□□ -0.04
CDH4P55283 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.78□□□□□ -0.04
CDH4P55283 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.78□□□□□ -0.04
CDH4P55283 IGHJ2P-201ENST00000454480 60 ntBASIC14.78□□□□□ -0.04
CDH4P55283 AC012618.1-201ENST00000461223 412 ntBASIC14.78□□□□□ -0.04
CDH4P55283 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH4P55283 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH4P55283 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDH4P55283 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH4P55283 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CDH4P55283 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.78□□□□□ -0.04
CDH4P55283 CU633904.3-201ENST00000624042 1029 ntBASIC14.78□□□□□ -0.04
CDH4P55283 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.78□□□□□ -0.04
CDH4P55283 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
CDH4P55283 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms