Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
NKX2-5P52952 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
NKX2-5P52952 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 PRYP6-201ENST00000514804 343 ntBASIC12.32□□□□□ -0.44
NKX2-5P52952 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
NKX2-5P52952 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 AC139887.3-201ENST00000568585 713 ntBASIC12.32□□□□□ -0.44
NKX2-5P52952 AC114341.1-201ENST00000618070 349 ntBASIC12.32□□□□□ -0.44
NKX2-5P52952 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NKX2-5P52952 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC12.32□□□□□ -0.44
NKX2-5P52952 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
NKX2-5P52952 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NKX2-5P52952 PPARD-205ENST00000448077 3516 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
NKX2-5P52952 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC12.32□□□□□ -0.44
NKX2-5P52952 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 CTAGE13P-201ENST00000416709 2446 ntBASIC12.31□□□□□ -0.44
NKX2-5P52952 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX2-5P52952 ABCD1P2-201ENST00000429313 1601 ntBASIC12.31□□□□□ -0.44
NKX2-5P52952 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.31□□□□□ -0.44
NKX2-5P52952 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.31□□□□□ -0.44
NKX2-5P52952 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
NKX2-5P52952 AZGP1P1-201ENST00000411909 902 ntBASIC12.31□□□□□ -0.44
NKX2-5P52952 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
NKX2-5P52952 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.31□□□□□ -0.44
NKX2-5P52952 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX2-5P52952 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.31□□□□□ -0.44
NKX2-5P52952 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX2-5P52952 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.31□□□□□ -0.44
NKX2-5P52952 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX2-5P52952 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.31□□□□□ -0.44
NKX2-5P52952 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.31□□□□□ -0.44
NKX2-5P52952 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
NKX2-5P52952 NKAPP1-205ENST00000585790 367 ntBASIC12.31□□□□□ -0.44
NKX2-5P52952 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX2-5P52952 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.31□□□□□ -0.44
NKX2-5P52952 AC002350.2-201ENST00000623894 1828 ntBASIC12.31□□□□□ -0.44
NKX2-5P52952 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX2-5P52952 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
NKX2-5P52952 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.31□□□□□ -0.44
NKX2-5P52952 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX2-5P52952 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX2-5P52952 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
NKX2-5P52952 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NKX2-5P52952 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC12.31□□□□□ -0.44
NKX2-5P52952 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
NKX2-5P52952 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC12.31□□□□□ -0.44
NKX2-5P52952 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.3□□□□□ -0.44
NKX2-5P52952 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
NKX2-5P52952 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NKX2-5P52952 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms