Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
CENPAP49450 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.32□□□□□ -0.28
CENPAP49450 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 DNM1P41-201ENST00000623634 3350 ntBASIC13.32□□□□□ -0.28
CENPAP49450 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.32□□□□□ -0.28
CENPAP49450 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.32□□□□□ -0.28
CENPAP49450 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.32□□□□□ -0.28
CENPAP49450 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.32□□□□□ -0.28
CENPAP49450 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.32□□□□□ -0.28
CENPAP49450 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.32□□□□□ -0.28
CENPAP49450 AC008494.3-201ENST00000606615 944 ntBASIC13.32□□□□□ -0.28
CENPAP49450 AP005019.2-201ENST00000615104 511 ntBASIC13.32□□□□□ -0.28
CENPAP49450 AJ011932.1-201ENST00000621707 465 ntBASIC13.32□□□□□ -0.28
CENPAP49450 CU634019.7-201ENST00000624153 1185 ntBASIC13.32□□□□□ -0.28
CENPAP49450 FP236241.2-201ENST00000624906 1185 ntBASIC13.32□□□□□ -0.28
CENPAP49450 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.32□□□□□ -0.28
CENPAP49450 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CENPAP49450 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CENPAP49450 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.32□□□□□ -0.28
CENPAP49450 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
CENPAP49450 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CENPAP49450 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CENPAP49450 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.32□□□□□ -0.28
CENPAP49450 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CENPAP49450 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CENPAP49450 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.31□□□□□ -0.28
CENPAP49450 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC13.31□□□□□ -0.28
CENPAP49450 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 AC006504.5-208ENST00000588784 2401 ntBASIC13.31□□□□□ -0.28
CENPAP49450 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.31□□□□□ -0.28
CENPAP49450 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.31□□□□□ -0.28
CENPAP49450 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.31□□□□□ -0.28
CENPAP49450 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.31□□□□□ -0.28
CENPAP49450 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 ACKR1-201ENST00000368121 1240 ntBASIC13.31□□□□□ -0.28
CENPAP49450 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.31□□□□□ -0.28
CENPAP49450 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.31□□□□□ -0.28
CENPAP49450 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.31□□□□□ -0.28
CENPAP49450 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CENPAP49450 ENPP7P5-201ENST00000541031 1031 ntBASIC13.31□□□□□ -0.28
CENPAP49450 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.31□□□□□ -0.28
CENPAP49450 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.31□□□□□ -0.28
CENPAP49450 LINC02560-201ENST00000596379 459 ntBASIC13.31□□□□□ -0.28
CENPAP49450 TMEM261P1-201ENST00000604899 340 ntBASIC13.31□□□□□ -0.28
CENPAP49450 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.31□□□□□ -0.28
CENPAP49450 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.31□□□□□ -0.28
CENPAP49450 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CENPAP49450 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CENPAP49450 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.3□□□□□ -0.28
CENPAP49450 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.3□□□□□ -0.28
CENPAP49450 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC13.3□□□□□ -0.28
CENPAP49450 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CENPAP49450 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CENPAP49450 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC13.3□□□□□ -0.28
CENPAP49450 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CENPAP49450 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
CENPAP49450 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.3□□□□□ -0.28
CENPAP49450 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.3□□□□□ -0.28
CENPAP49450 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 FO681548.1-201ENST00000455617 1132 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms