Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AP006288.1-201ENST00000446065 395 ntBASIC11.97□□□□□ -0.49
NKX2-1P43699 AC023141.5-201ENST00000458585 616 ntBASIC11.97□□□□□ -0.49
NKX2-1P43699 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.97□□□□□ -0.49
NKX2-1P43699 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-1P43699 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.97□□□□□ -0.49
NKX2-1P43699 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
NKX2-1P43699 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.97□□□□□ -0.49
NKX2-1P43699 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.97□□□□□ -0.49
NKX2-1P43699 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.97□□□□□ -0.49
NKX2-1P43699 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.97□□□□□ -0.49
NKX2-1P43699 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.97□□□□□ -0.49
NKX2-1P43699 AP001059.3-201ENST00000619053 235 ntBASIC11.97□□□□□ -0.49
NKX2-1P43699 AL158212.4-201ENST00000624062 1286 ntBASIC11.97□□□□□ -0.49
NKX2-1P43699 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-1P43699 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.97□□□□□ -0.49
NKX2-1P43699 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
NKX2-1P43699 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-1P43699 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-1P43699 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
NKX2-1P43699 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
NKX2-1P43699 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
NKX2-1P43699 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
NKX2-1P43699 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-1P43699 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-1P43699 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-1P43699 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-1P43699 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
NKX2-1P43699 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
NKX2-1P43699 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-1P43699 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
NKX2-1P43699 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
NKX2-1P43699 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-1P43699 NME1-209ENST00000511355 1645 ntTSL 5 BASIC11.97□□□□□ -0.49
NKX2-1P43699 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NKX2-1P43699 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.96□□□□□ -0.49
NKX2-1P43699 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.96□□□□□ -0.49
NKX2-1P43699 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.96□□□□□ -0.49
NKX2-1P43699 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
NKX2-1P43699 AC003102.2-201ENST00000589195 1469 ntBASIC11.96□□□□□ -0.49
NKX2-1P43699 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
NKX2-1P43699 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
NKX2-1P43699 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
NKX2-1P43699 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
NKX2-1P43699 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC11.96□□□□□ -0.49
NKX2-1P43699 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.96□□□□□ -0.49
NKX2-1P43699 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.96□□□□□ -0.49
NKX2-1P43699 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.96□□□□□ -0.49
NKX2-1P43699 AC022616.1-201ENST00000518688 554 ntBASIC11.96□□□□□ -0.49
NKX2-1P43699 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
NKX2-1P43699 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
NKX2-1P43699 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
NKX2-1P43699 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.96□□□□□ -0.49
NKX2-1P43699 AL596442.2-201ENST00000610240 980 ntBASIC11.96□□□□□ -0.49
NKX2-1P43699 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.96□□□□□ -0.49
NKX2-1P43699 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
NKX2-1P43699 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 AC079781.4-201ENST00000641908 219 ntBASIC11.96□□□□□ -0.49
NKX2-1P43699 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
NKX2-1P43699 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
NKX2-1P43699 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NKX2-1P43699 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.96□□□□□ -0.49
NKX2-1P43699 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-1P43699 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-1P43699 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-1P43699 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-1P43699 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-1P43699 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-1P43699 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-1P43699 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
NKX2-1P43699 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX2-1P43699 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
NKX2-1P43699 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX2-1P43699 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX2-1P43699 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX2-1P43699 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.95□□□□□ -0.5
NKX2-1P43699 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX2-1P43699 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX2-1P43699 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.95□□□□□ -0.5
NKX2-1P43699 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
NKX2-1P43699 KHSRPP1-201ENST00000427983 1768 ntBASIC11.95□□□□□ -0.5
NKX2-1P43699 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NKX2-1P43699 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
NKX2-1P43699 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms