Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
RFC5P40937 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFC5P40937 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RFC5P40937 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
RFC5P40937 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16■□□□□ 0.15
RFC5P40937 AC079781.5-202ENST00000641784 3743 ntBASIC16■□□□□ 0.15
RFC5P40937 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16■□□□□ 0.15
RFC5P40937 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
RFC5P40937 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16■□□□□ 0.15
RFC5P40937 INTS4P1-203ENST00000641008 3683 ntBASIC16■□□□□ 0.15
RFC5P40937 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RFC5P40937 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFC5P40937 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16■□□□□ 0.15
RFC5P40937 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFC5P40937 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFC5P40937 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RFC5P40937 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16■□□□□ 0.15
RFC5P40937 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.99■□□□□ 0.15
RFC5P40937 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 AC011498.7-201ENST00000624986 2027 ntBASIC15.99■□□□□ 0.15
RFC5P40937 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.99■□□□□ 0.15
RFC5P40937 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.99■□□□□ 0.15
RFC5P40937 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
RFC5P40937 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFC5P40937 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RFC5P40937 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.99■□□□□ 0.15
RFC5P40937 ELK2AP-201ENST00000392510 1007 ntBASIC15.99■□□□□ 0.15
RFC5P40937 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.99■□□□□ 0.15
RFC5P40937 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.99■□□□□ 0.15
RFC5P40937 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 AC092580.1-201ENST00000433998 658 ntBASIC15.99■□□□□ 0.15
RFC5P40937 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.99■□□□□ 0.15
RFC5P40937 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 RN7SL258P-201ENST00000478664 300 ntBASIC15.99■□□□□ 0.15
RFC5P40937 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.99■□□□□ 0.15
RFC5P40937 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.99■□□□□ 0.15
RFC5P40937 AL606495.2-201ENST00000605867 535 ntBASIC15.99■□□□□ 0.15
RFC5P40937 AL022334.2-201ENST00000610000 484 ntBASIC15.99■□□□□ 0.15
RFC5P40937 MEG3_2.1-201ENST00000611456 105 ntBASIC15.99■□□□□ 0.15
RFC5P40937 AF254983.2-201ENST00000612331 135 ntBASIC15.99■□□□□ 0.15
RFC5P40937 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.99■□□□□ 0.15
RFC5P40937 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.99■□□□□ 0.15
RFC5P40937 AP001267.2-201ENST00000532619 2086 ntBASIC15.99■□□□□ 0.15
RFC5P40937 AC232323.1-201ENST00000540724 2099 ntBASIC15.99■□□□□ 0.15
RFC5P40937 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.99■□□□□ 0.15
RFC5P40937 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFC5P40937 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFC5P40937 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFC5P40937 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFC5P40937 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.99■□□□□ 0.15
RFC5P40937 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.99■□□□□ 0.15
RFC5P40937 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
RFC5P40937 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.98■□□□□ 0.15
RFC5P40937 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RFC5P40937 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
RFC5P40937 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.98■□□□□ 0.15
RFC5P40937 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.98■□□□□ 0.15
RFC5P40937 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.98■□□□□ 0.15
RFC5P40937 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.98■□□□□ 0.15
RFC5P40937 RN7SL530P-201ENST00000485097 298 ntBASIC15.98■□□□□ 0.15
RFC5P40937 IMP3P2-201ENST00000489760 475 ntBASIC15.98■□□□□ 0.15
RFC5P40937 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RFC5P40937 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.98■□□□□ 0.15
RFC5P40937 AC242376.1-201ENST00000559033 726 ntBASIC15.98■□□□□ 0.15
RFC5P40937 FGFR3P5-201ENST00000564496 886 ntBASIC15.98■□□□□ 0.15
RFC5P40937 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.98■□□□□ 0.15
RFC5P40937 MIR6769A-201ENST00000617340 73 ntBASIC15.98■□□□□ 0.15
RFC5P40937 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms