Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KRT9P35527 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.96■□□□□ 0.15
KRT9P35527 AC138696.2-201ENST00000607376 223 ntBASIC15.96■□□□□ 0.15
KRT9P35527 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT9P35527 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
KRT9P35527 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.96■□□□□ 0.15
KRT9P35527 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
KRT9P35527 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT9P35527 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.96■□□□□ 0.15
KRT9P35527 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.96■□□□□ 0.15
KRT9P35527 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT9P35527 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.96■□□□□ 0.15
KRT9P35527 DGCR9-201ENST00000609630 2415 ntBASIC15.96■□□□□ 0.15
KRT9P35527 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
KRT9P35527 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
KRT9P35527 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
KRT9P35527 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
KRT9P35527 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
KRT9P35527 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.96■□□□□ 0.14
KRT9P35527 AC015909.5-201ENST00000624336 2266 ntBASIC15.96■□□□□ 0.14
KRT9P35527 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
KRT9P35527 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
KRT9P35527 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT9P35527 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.95■□□□□ 0.14
KRT9P35527 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
KRT9P35527 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT9P35527 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.95■□□□□ 0.14
KRT9P35527 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT9P35527 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
KRT9P35527 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
KRT9P35527 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
KRT9P35527 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
KRT9P35527 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
KRT9P35527 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
KRT9P35527 AL512384.1-201ENST00000406683 331 ntBASIC15.95■□□□□ 0.14
KRT9P35527 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.95■□□□□ 0.14
KRT9P35527 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT9P35527 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT9P35527 AC245100.3-201ENST00000441281 285 ntBASIC15.95■□□□□ 0.14
KRT9P35527 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT9P35527 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.95■□□□□ 0.14
KRT9P35527 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.95■□□□□ 0.14
KRT9P35527 AC015936.2-201ENST00000593177 259 ntBASIC15.95■□□□□ 0.14
KRT9P35527 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
KRT9P35527 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
KRT9P35527 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT9P35527 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
KRT9P35527 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT9P35527 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
KRT9P35527 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT9P35527 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
KRT9P35527 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.95■□□□□ 0.14
KRT9P35527 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
KRT9P35527 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.95■□□□□ 0.14
KRT9P35527 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
KRT9P35527 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT9P35527 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
KRT9P35527 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
KRT9P35527 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
KRT9P35527 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 AC072061.1-201ENST00000569710 2234 ntBASIC15.94■□□□□ 0.14
KRT9P35527 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.94■□□□□ 0.14
KRT9P35527 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.94■□□□□ 0.14
KRT9P35527 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
KRT9P35527 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.94■□□□□ 0.14
KRT9P35527 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
KRT9P35527 AP001889.1-201ENST00000525414 633 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms