Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
HOXC8P31273 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HOXC8P31273 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HOXC8P31273 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
HOXC8P31273 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.53■□□□□ 0.08
HOXC8P31273 HMGA1P1-201ENST00000415560 1062 ntBASIC15.53■□□□□ 0.08
HOXC8P31273 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HOXC8P31273 KRT18P62-201ENST00000446618 1287 ntBASIC15.53■□□□□ 0.08
HOXC8P31273 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HOXC8P31273 RN7SL494P-201ENST00000461517 304 ntBASIC15.53■□□□□ 0.08
HOXC8P31273 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HOXC8P31273 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC15.53■□□□□ 0.08
HOXC8P31273 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.53■□□□□ 0.08
HOXC8P31273 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.53■□□□□ 0.08
HOXC8P31273 AC132825.4-202ENST00000578792 434 ntBASIC15.53■□□□□ 0.08
HOXC8P31273 AC011247.3-201ENST00000603297 438 ntBASIC15.53■□□□□ 0.08
HOXC8P31273 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
HOXC8P31273 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC15.53■□□□□ 0.08
HOXC8P31273 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HOXC8P31273 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HOXC8P31273 CICP24-201ENST00000605464 2705 ntBASIC15.53■□□□□ 0.08
HOXC8P31273 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HOXC8P31273 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HOXC8P31273 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.53■□□□□ 0.08
HOXC8P31273 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HOXC8P31273 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HOXC8P31273 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HOXC8P31273 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
HOXC8P31273 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HOXC8P31273 AC004554.1-201ENST00000422830 1468 ntBASIC15.52■□□□□ 0.08
HOXC8P31273 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.52■□□□□ 0.08
HOXC8P31273 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HOXC8P31273 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC15.52■□□□□ 0.08
HOXC8P31273 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HOXC8P31273 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HOXC8P31273 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.52■□□□□ 0.08
HOXC8P31273 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HOXC8P31273 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HOXC8P31273 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HOXC8P31273 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
HOXC8P31273 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.52■□□□□ 0.08
HOXC8P31273 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HOXC8P31273 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HOXC8P31273 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
HOXC8P31273 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.52■□□□□ 0.08
HOXC8P31273 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC15.52■□□□□ 0.08
HOXC8P31273 EEF1GP8-201ENST00000506566 1154 ntBASIC15.52■□□□□ 0.08
HOXC8P31273 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
HOXC8P31273 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HOXC8P31273 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.52■□□□□ 0.08
HOXC8P31273 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC15.52■□□□□ 0.08
HOXC8P31273 BATF-202ENST00000555504 361 ntTSL 2 BASIC15.52■□□□□ 0.08
HOXC8P31273 DLK1-205ENST00000556051 469 ntTSL 2 BASIC15.52■□□□□ 0.08
HOXC8P31273 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC15.52■□□□□ 0.08
HOXC8P31273 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC15.52■□□□□ 0.08
HOXC8P31273 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.52■□□□□ 0.08
HOXC8P31273 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.52■□□□□ 0.08
HOXC8P31273 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.52■□□□□ 0.08
HOXC8P31273 MIR6746-201ENST00000620971 63 ntBASIC15.52■□□□□ 0.08
HOXC8P31273 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HOXC8P31273 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.52■□□□□ 0.07
HOXC8P31273 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HOXC8P31273 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
HOXC8P31273 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HOXC8P31273 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.52■□□□□ 0.07
HOXC8P31273 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HOXC8P31273 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HOXC8P31273 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.52■□□□□ 0.07
HOXC8P31273 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HOXC8P31273 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HOXC8P31273 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HOXC8P31273 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HOXC8P31273 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HOXC8P31273 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HOXC8P31273 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HOXC8P31273 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HOXC8P31273 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HOXC8P31273 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.51■□□□□ 0.07
HOXC8P31273 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.51■□□□□ 0.07
HOXC8P31273 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.51■□□□□ 0.07
HOXC8P31273 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
HOXC8P31273 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.51■□□□□ 0.07
HOXC8P31273 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC15.51■□□□□ 0.07
HOXC8P31273 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HOXC8P31273 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.51■□□□□ 0.07
HOXC8P31273 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HOXC8P31273 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.51■□□□□ 0.07
HOXC8P31273 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms