Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
CD40LGP29965 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.94□□□□□ -0.34
CD40LGP29965 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.94□□□□□ -0.34
CD40LGP29965 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CD40LGP29965 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.94□□□□□ -0.34
CD40LGP29965 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.94□□□□□ -0.34
CD40LGP29965 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 FAM220BP-201ENST00000377689 816 ntBASIC12.94□□□□□ -0.34
CD40LGP29965 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.94□□□□□ -0.34
CD40LGP29965 TFAMP1-201ENST00000412727 736 ntBASIC12.94□□□□□ -0.34
CD40LGP29965 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 UPF3AP3-201ENST00000420996 769 ntBASIC12.94□□□□□ -0.34
CD40LGP29965 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.94□□□□□ -0.34
CD40LGP29965 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.94□□□□□ -0.34
CD40LGP29965 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.94□□□□□ -0.34
CD40LGP29965 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 AC026120.1-201ENST00000611536 926 ntBASIC12.94□□□□□ -0.34
CD40LGP29965 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.94□□□□□ -0.34
CD40LGP29965 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 AL157414.3-201ENST00000624276 1954 ntBASIC12.94□□□□□ -0.34
CD40LGP29965 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.94□□□□□ -0.34
CD40LGP29965 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 ELL2P1-201ENST00000413990 1906 ntBASIC12.94□□□□□ -0.34
CD40LGP29965 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CD40LGP29965 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CD40LGP29965 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.94□□□□□ -0.34
CD40LGP29965 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD40LGP29965 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CD40LGP29965 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
CD40LGP29965 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CD40LGP29965 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
CD40LGP29965 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.93□□□□□ -0.34
CD40LGP29965 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.93□□□□□ -0.34
CD40LGP29965 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CD40LGP29965 AC211486.1-202ENST00000416371 468 ntBASIC12.93□□□□□ -0.34
CD40LGP29965 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.93□□□□□ -0.34
CD40LGP29965 AC211476.1-201ENST00000503899 468 ntBASIC12.93□□□□□ -0.34
CD40LGP29965 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CD40LGP29965 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.93□□□□□ -0.34
CD40LGP29965 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.93□□□□□ -0.34
CD40LGP29965 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
CD40LGP29965 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.93□□□□□ -0.34
CD40LGP29965 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.93□□□□□ -0.34
CD40LGP29965 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.93□□□□□ -0.34
CD40LGP29965 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.93□□□□□ -0.34
CD40LGP29965 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD40LGP29965 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.93□□□□□ -0.34
CD40LGP29965 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CD40LGP29965 AL645937.6-201ENST00000641122 3727 ntBASIC12.93□□□□□ -0.34
CD40LGP29965 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms