Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHMLP26374 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 FAM90A12P-201ENST00000519497 2375 ntBASIC17.45■□□□□ 0.38
CHMLP26374 FAM90A24P-201ENST00000520792 2369 ntBASIC17.45■□□□□ 0.38
CHMLP26374 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHMLP26374 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CHMLP26374 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMLP26374 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMLP26374 AC072061.1-201ENST00000569710 2234 ntBASIC17.44■□□□□ 0.38
CHMLP26374 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMLP26374 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 AL928654.5-201ENST00000624831 2501 ntBASIC17.44■□□□□ 0.38
CHMLP26374 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CHMLP26374 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.44■□□□□ 0.38
CHMLP26374 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 VDAC1P1-201ENST00000439229 848 ntBASIC17.44■□□□□ 0.38
CHMLP26374 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 SCARNA21-201ENST00000517026 139 ntBASIC17.44■□□□□ 0.38
CHMLP26374 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMLP26374 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
CHMLP26374 AC010328.2-201ENST00000597698 1111 ntBASIC17.44■□□□□ 0.38
CHMLP26374 MIR6805-201ENST00000615055 62 ntBASIC17.44■□□□□ 0.38
CHMLP26374 AL096828.3-201ENST00000615354 462 ntBASIC17.44■□□□□ 0.38
CHMLP26374 AC133540.1-201ENST00000620845 1019 ntBASIC17.44■□□□□ 0.38
CHMLP26374 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMLP26374 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CHMLP26374 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CHMLP26374 CCT8L1P-201ENST00000465400 1674 ntBASIC17.44■□□□□ 0.38
CHMLP26374 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CHMLP26374 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CHMLP26374 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CHMLP26374 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CHMLP26374 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMLP26374 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CHMLP26374 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC17.44■□□□□ 0.38
CHMLP26374 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMLP26374 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMLP26374 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMLP26374 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMLP26374 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CHMLP26374 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC17.43■□□□□ 0.38
CHMLP26374 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMLP26374 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMLP26374 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMLP26374 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CHMLP26374 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMLP26374 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMLP26374 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CHMLP26374 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.43■□□□□ 0.38
CHMLP26374 MTX1P1-201ENST00000440904 838 ntBASIC17.43■□□□□ 0.38
CHMLP26374 OR2R1P-201ENST00000441404 914 ntBASIC17.43■□□□□ 0.38
CHMLP26374 GOLGA2P4-201ENST00000441462 777 ntBASIC17.43■□□□□ 0.38
CHMLP26374 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CHMLP26374 RPL18P13-201ENST00000478088 569 ntBASIC17.43■□□□□ 0.38
CHMLP26374 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMLP26374 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMLP26374 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMLP26374 PGAM1P5-201ENST00000548011 764 ntBASIC17.43■□□□□ 0.38
CHMLP26374 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMLP26374 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.43■□□□□ 0.38
CHMLP26374 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.43■□□□□ 0.38
CHMLP26374 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMLP26374 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.43■□□□□ 0.38
CHMLP26374 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMLP26374 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMLP26374 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMLP26374 CETP-203ENST00000566128 1733 ntTSL 5 BASIC17.43■□□□□ 0.38
CHMLP26374 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMLP26374 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC17.43■□□□□ 0.38
CHMLP26374 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMLP26374 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHMLP26374 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMLP26374 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMLP26374 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMLP26374 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHMLP26374 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms