Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 RPS2P32-201ENST00000439199 892 ntBASIC14.69□□□□□ -0.06
HLA-DPA1P20036 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 HSPB1P2-201ENST00000448722 546 ntBASIC14.69□□□□□ -0.06
HLA-DPA1P20036 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 BNIP3P42-201ENST00000454982 569 ntBASIC14.69□□□□□ -0.06
HLA-DPA1P20036 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 RBM8B-201ENST00000555532 525 ntBASIC14.69□□□□□ -0.06
HLA-DPA1P20036 BNIP3P29-201ENST00000598302 571 ntBASIC14.69□□□□□ -0.06
HLA-DPA1P20036 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 AC011447.5-201ENST00000616168 564 ntBASIC14.69□□□□□ -0.06
HLA-DPA1P20036 AC009542.2-202ENST00000619004 1067 ntBASIC14.69□□□□□ -0.06
HLA-DPA1P20036 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 LINC01230-201ENST00000625222 3017 ntBASIC14.69□□□□□ -0.06
HLA-DPA1P20036 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 HSPA8P5-201ENST00000456928 2069 ntBASIC14.69□□□□□ -0.06
HLA-DPA1P20036 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DPA1P20036 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.68□□□□□ -0.06
HLA-DPA1P20036 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 AL008718.2-201ENST00000609206 1313 ntBASIC14.68□□□□□ -0.06
HLA-DPA1P20036 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 RN7SL560P-201ENST00000577943 264 ntBASIC14.68□□□□□ -0.06
HLA-DPA1P20036 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 Z98259.2-201ENST00000641583 609 ntBASIC14.68□□□□□ -0.06
HLA-DPA1P20036 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DPA1P20036 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms