Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 AL391825.1-201ENST00000457671 1364 ntBASIC17.46■□□□□ 0.39
NCLP19338 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.46■□□□□ 0.39
NCLP19338 NME2P1-201ENST00000426182 414 ntBASIC17.46■□□□□ 0.39
NCLP19338 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.46■□□□□ 0.39
NCLP19338 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.46■□□□□ 0.39
NCLP19338 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.46■□□□□ 0.39
NCLP19338 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.46■□□□□ 0.39
NCLP19338 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NCLP19338 AL158212.4-201ENST00000624062 1286 ntBASIC17.46■□□□□ 0.39
NCLP19338 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.46■□□□□ 0.39
NCLP19338 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
NCLP19338 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.46■□□□□ 0.39
NCLP19338 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.46■□□□□ 0.39
NCLP19338 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.46■□□□□ 0.39
NCLP19338 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NCLP19338 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC17.46■□□□□ 0.39
NCLP19338 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.46■□□□□ 0.38
NCLP19338 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NCLP19338 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
NCLP19338 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NCLP19338 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC17.46■□□□□ 0.38
NCLP19338 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
NCLP19338 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC17.46■□□□□ 0.38
NCLP19338 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.45■□□□□ 0.38
NCLP19338 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
NCLP19338 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.45■□□□□ 0.38
NCLP19338 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.45■□□□□ 0.38
NCLP19338 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NCLP19338 CES1P1-201ENST00000421606 1704 ntBASIC17.45■□□□□ 0.38
NCLP19338 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC17.45■□□□□ 0.38
NCLP19338 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC17.45■□□□□ 0.38
NCLP19338 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
NCLP19338 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
NCLP19338 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.45■□□□□ 0.38
NCLP19338 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NCLP19338 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.45■□□□□ 0.38
NCLP19338 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NCLP19338 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.45■□□□□ 0.38
NCLP19338 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.45■□□□□ 0.38
NCLP19338 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
NCLP19338 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.45■□□□□ 0.38
NCLP19338 AL158070.2-201ENST00000623713 1621 ntBASIC17.45■□□□□ 0.38
NCLP19338 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
NCLP19338 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC17.45■□□□□ 0.38
NCLP19338 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NCLP19338 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NCLP19338 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
NCLP19338 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.45■□□□□ 0.38
NCLP19338 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NCLP19338 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NCLP19338 CSPG4P11-201ENST00000560634 4910 ntBASIC17.45■□□□□ 0.38
NCLP19338 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NCLP19338 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC17.44■□□□□ 0.38
NCLP19338 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NCLP19338 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC17.44■□□□□ 0.38
NCLP19338 CICP16-201ENST00000502609 2813 ntBASIC17.44■□□□□ 0.38
NCLP19338 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NCLP19338 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms