Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 AC090643.2-201ENST00000623442 2029 ntBASIC14.7□□□□□ -0.06
HLA-DQB2P05538 AC018629.1-201ENST00000623381 1736 ntBASIC14.7□□□□□ -0.06
HLA-DQB2P05538 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 OR2R1P-201ENST00000441404 914 ntBASIC14.7□□□□□ -0.06
HLA-DQB2P05538 FAM8A2P-201ENST00000528813 1142 ntBASIC14.7□□□□□ -0.06
HLA-DQB2P05538 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 AC021016.3-201ENST00000608367 477 ntBASIC14.7□□□□□ -0.06
HLA-DQB2P05538 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 AP000346.4-201ENST00000614827 381 ntBASIC14.7□□□□□ -0.06
HLA-DQB2P05538 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 AC104306.2-201ENST00000451877 341 ntBASIC14.69□□□□□ -0.06
HLA-DQB2P05538 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 AC108725.1-201ENST00000495472 409 ntBASIC14.69□□□□□ -0.06
HLA-DQB2P05538 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 AC022217.1-201ENST00000521069 738 ntBASIC14.69□□□□□ -0.06
HLA-DQB2P05538 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 PGAM1P5-201ENST00000548011 764 ntBASIC14.69□□□□□ -0.06
HLA-DQB2P05538 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 AL008638.5-201ENST00000623814 1298 ntBASIC14.69□□□□□ -0.06
HLA-DQB2P05538 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 AC068587.8-201ENST00000641239 219 ntBASIC14.69□□□□□ -0.06
HLA-DQB2P05538 AC004923.1-202ENST00000642106 209 ntBASIC14.69□□□□□ -0.06
HLA-DQB2P05538 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DQB2P05538 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms