Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
PCCBP05166 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.38□□□□□ -0.11
PCCBP05166 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.38□□□□□ -0.11
PCCBP05166 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCCBP05166 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCCBP05166 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.38□□□□□ -0.11
PCCBP05166 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
PCCBP05166 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCCBP05166 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCCBP05166 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCCBP05166 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCCBP05166 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.38□□□□□ -0.11
PCCBP05166 LINC01165-201ENST00000445190 1623 ntBASIC14.37□□□□□ -0.11
PCCBP05166 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.37□□□□□ -0.11
PCCBP05166 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 AC015909.3-201ENST00000572855 1794 ntBASIC14.37□□□□□ -0.11
PCCBP05166 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.37□□□□□ -0.11
PCCBP05166 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCCBP05166 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PCCBP05166 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.37□□□□□ -0.11
PCCBP05166 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 RNA5SP359-201ENST00000364838 113 ntBASIC14.37□□□□□ -0.11
PCCBP05166 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.37□□□□□ -0.11
PCCBP05166 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.37□□□□□ -0.11
PCCBP05166 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.37□□□□□ -0.11
PCCBP05166 AL353637.1-201ENST00000451571 732 ntBASIC14.37□□□□□ -0.11
PCCBP05166 RN7SL769P-201ENST00000469386 295 ntBASIC14.37□□□□□ -0.11
PCCBP05166 RNA5SP423-201ENST00000517127 109 ntBASIC14.37□□□□□ -0.11
PCCBP05166 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.37□□□□□ -0.11
PCCBP05166 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PCCBP05166 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.37□□□□□ -0.11
PCCBP05166 AL109837.1-201ENST00000603272 613 ntBASIC14.37□□□□□ -0.11
PCCBP05166 AC084346.2-201ENST00000607097 949 ntBASIC14.37□□□□□ -0.11
PCCBP05166 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.37□□□□□ -0.11
PCCBP05166 AL353770.1-201ENST00000614915 403 ntBASIC14.37□□□□□ -0.11
PCCBP05166 AC015967.2-201ENST00000624092 234 ntBASIC14.37□□□□□ -0.11
PCCBP05166 AC006435.4-201ENST00000625037 234 ntBASIC14.37□□□□□ -0.11
PCCBP05166 AL356737.1-201ENST00000634391 234 ntBASIC14.37□□□□□ -0.11
PCCBP05166 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.37□□□□□ -0.11
PCCBP05166 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
PCCBP05166 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PCCBP05166 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PCCBP05166 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.37□□□□□ -0.11
PCCBP05166 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.37□□□□□ -0.11
PCCBP05166 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.37□□□□□ -0.11
PCCBP05166 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCCBP05166 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PCCBP05166 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PCCBP05166 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.36□□□□□ -0.11
PCCBP05166 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PCCBP05166 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PCCBP05166 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.36□□□□□ -0.11
PCCBP05166 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.36□□□□□ -0.11
PCCBP05166 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCCBP05166 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.36□□□□□ -0.11
PCCBP05166 SBF1P1-201ENST00000444527 5631 ntBASIC14.36□□□□□ -0.11
PCCBP05166 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCCBP05166 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCCBP05166 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.36□□□□□ -0.11
PCCBP05166 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCCBP05166 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCCBP05166 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCCBP05166 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCCBP05166 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.36□□□□□ -0.11
PCCBP05166 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.36□□□□□ -0.11
PCCBP05166 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.36□□□□□ -0.11
PCCBP05166 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.36□□□□□ -0.11
PCCBP05166 IGLV3-15-201ENST00000518356 244 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms