Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC3O60481 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
ZIC3O60481 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
ZIC3O60481 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC3O60481 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC3O60481 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC3O60481 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
ZIC3O60481 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC3O60481 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC3O60481 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC3O60481 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
ZIC3O60481 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
ZIC3O60481 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
ZIC3O60481 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC3O60481 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ZIC3O60481 AL022313.4-201ENST00000562756 2046 ntBASIC13.02□□□□□ -0.33
ZIC3O60481 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.02□□□□□ -0.33
ZIC3O60481 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.02□□□□□ -0.33
ZIC3O60481 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.02□□□□□ -0.33
ZIC3O60481 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.02□□□□□ -0.33
ZIC3O60481 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.02□□□□□ -0.33
ZIC3O60481 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.02□□□□□ -0.33
ZIC3O60481 CHMP4BP1-201ENST00000556017 588 ntBASIC13.02□□□□□ -0.33
ZIC3O60481 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.02□□□□□ -0.33
ZIC3O60481 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.02□□□□□ -0.33
ZIC3O60481 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.02□□□□□ -0.33
ZIC3O60481 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.02□□□□□ -0.33
ZIC3O60481 AC020910.6-201ENST00000623084 1459 ntBASIC13.02□□□□□ -0.33
ZIC3O60481 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.02□□□□□ -0.33
ZIC3O60481 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 CCT8L1P-201ENST00000465400 1674 ntBASIC13.02□□□□□ -0.33
ZIC3O60481 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.02□□□□□ -0.33
ZIC3O60481 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.02□□□□□ -0.33
ZIC3O60481 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC3O60481 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ZIC3O60481 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.01□□□□□ -0.33
ZIC3O60481 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.01□□□□□ -0.33
ZIC3O60481 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
ZIC3O60481 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ZIC3O60481 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.01□□□□□ -0.33
ZIC3O60481 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ZIC3O60481 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.01□□□□□ -0.33
ZIC3O60481 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.01□□□□□ -0.33
ZIC3O60481 AL133466.1-201ENST00000447582 150 ntBASIC13.01□□□□□ -0.33
ZIC3O60481 AC073150.1-201ENST00000450406 1084 ntBASIC13.01□□□□□ -0.33
ZIC3O60481 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.01□□□□□ -0.33
ZIC3O60481 POU5F1P2-201ENST00000521750 823 ntBASIC13.01□□□□□ -0.33
ZIC3O60481 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.01□□□□□ -0.33
ZIC3O60481 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.01□□□□□ -0.33
ZIC3O60481 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.01□□□□□ -0.33
ZIC3O60481 RN7SL574P-201ENST00000581512 297 ntBASIC13.01□□□□□ -0.33
ZIC3O60481 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.01□□□□□ -0.33
ZIC3O60481 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.01□□□□□ -0.33
ZIC3O60481 AC097724.1-201ENST00000609581 426 ntBASIC13.01□□□□□ -0.33
ZIC3O60481 MEG3_2.1-201ENST00000611456 105 ntBASIC13.01□□□□□ -0.33
ZIC3O60481 AF254983.2-201ENST00000612331 135 ntBASIC13.01□□□□□ -0.33
ZIC3O60481 AL021578.1-201ENST00000613646 709 ntBASIC13.01□□□□□ -0.33
ZIC3O60481 CU633904.3-201ENST00000624042 1029 ntBASIC13.01□□□□□ -0.33
ZIC3O60481 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
ZIC3O60481 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 AC015909.3-201ENST00000572855 1794 ntBASIC13.01□□□□□ -0.33
ZIC3O60481 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ZIC3O60481 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZIC3O60481 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
ZIC3O60481 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms