Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
O00370 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
O00370 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
O00370 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.52■□□□□ 0.07
O00370 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
O00370 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
O00370 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
O00370 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
O00370 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.52■□□□□ 0.07
O00370 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.51■□□□□ 0.07
O00370 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
O00370 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
O00370 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.51■□□□□ 0.07
O00370 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
O00370 AL008718.2-201ENST00000609206 1313 ntBASIC15.51■□□□□ 0.07
O00370 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.51■□□□□ 0.07
O00370 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.51■□□□□ 0.07
O00370 FAM58BP-201ENST00000439056 645 ntBASIC15.51■□□□□ 0.07
O00370 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.51■□□□□ 0.07
O00370 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.51■□□□□ 0.07
O00370 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
O00370 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.51■□□□□ 0.07
O00370 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.51■□□□□ 0.07
O00370 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.51■□□□□ 0.07
O00370 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.51■□□□□ 0.07
O00370 AC104982.3-201ENST00000581995 514 ntBASIC15.51■□□□□ 0.07
O00370 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.51■□□□□ 0.07
O00370 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
O00370 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
O00370 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.51■□□□□ 0.07
O00370 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.51■□□□□ 0.07
O00370 AC016397.2-201ENST00000624848 1985 ntBASIC15.51■□□□□ 0.07
O00370 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
O00370 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
O00370 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.51■□□□□ 0.07
O00370 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.51■□□□□ 0.07
O00370 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.51■□□□□ 0.07
O00370 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
O00370 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
O00370 CICP17-201ENST00000418553 2377 ntBASIC15.5■□□□□ 0.07
O00370 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.5■□□□□ 0.07
O00370 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
O00370 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.5■□□□□ 0.07
O00370 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 MST1P2-201ENST00000457982 2291 ntBASIC15.5■□□□□ 0.07
O00370 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.5■□□□□ 0.07
O00370 AC018735.1-201ENST00000437208 1502 ntBASIC15.5■□□□□ 0.07
O00370 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
O00370 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
O00370 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.5■□□□□ 0.07
O00370 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.5■□□□□ 0.07
O00370 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.5■□□□□ 0.07
O00370 AC012441.2-201ENST00000444843 739 ntBASIC15.5■□□□□ 0.07
O00370 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.5■□□□□ 0.07
O00370 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.5■□□□□ 0.07
O00370 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.5■□□□□ 0.07
O00370 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.5■□□□□ 0.07
O00370 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.5■□□□□ 0.07
O00370 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
O00370 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
O00370 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
O00370 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms