Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCDC188H7C350 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC188H7C350 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC188H7C350 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC188H7C350 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC188H7C350 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CCDC188H7C350 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC188H7C350 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC188H7C350 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCDC188H7C350 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC188H7C350 AC136604.1-202ENST00000425471 771 ntBASIC15.14■□□□□ 0.01
CCDC188H7C350 AC055876.3-201ENST00000431496 288 ntBASIC15.14■□□□□ 0.01
CCDC188H7C350 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC188H7C350 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.14■□□□□ 0.01
CCDC188H7C350 AP001063.1-201ENST00000568332 529 ntBASIC15.14■□□□□ 0.01
CCDC188H7C350 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC188H7C350 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC188H7C350 AC133539.2-201ENST00000604757 467 ntBASIC15.14■□□□□ 0.01
CCDC188H7C350 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC188H7C350 AC138649.4-201ENST00000612222 287 ntBASIC15.14■□□□□ 0.01
CCDC188H7C350 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC188H7C350 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC188H7C350 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CCDC188H7C350 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCDC188H7C350 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC188H7C350 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC188H7C350 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC188H7C350 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC188H7C350 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC188H7C350 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC188H7C350 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCDC188H7C350 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CCDC188H7C350 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCDC188H7C350 BEND3P3-201ENST00000611030 2440 ntBASIC15.13■□□□□ 0.01
CCDC188H7C350 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCDC188H7C350 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC188H7C350 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CCDC188H7C350 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC188H7C350 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC188H7C350 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCDC188H7C350 AC022137.2-201ENST00000503482 481 ntBASIC15.13■□□□□ 0.01
CCDC188H7C350 AP000593.2-201ENST00000542775 1433 ntBASIC15.13■□□□□ 0.01
CCDC188H7C350 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC188H7C350 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC188H7C350 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC188H7C350 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC188H7C350 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC188H7C350 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCDC188H7C350 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 AL928654.5-201ENST00000624831 2501 ntBASIC15.13■□□□□ 0.01
CCDC188H7C350 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC188H7C350 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCDC188H7C350 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCDC188H7C350 MKRN5P-201ENST00000445263 1467 ntBASIC15.13■□□□□ 0.01
CCDC188H7C350 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCDC188H7C350 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC188H7C350 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCDC188H7C350 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC188H7C350 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC188H7C350 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC188H7C350 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC188H7C350 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms