Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 AC073592.8-201ENST00000624126 511 ntBASIC15.59■□□□□ 0.09
CTAGE9A4FU28 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 AL118506.1-201ENST00000601296 3082 ntBASIC15.59■□□□□ 0.09
CTAGE9A4FU28 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC15.59■□□□□ 0.09
CTAGE9A4FU28 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC15.58■□□□□ 0.09
CTAGE9A4FU28 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CTAGE9A4FU28 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CTAGE9A4FU28 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CTAGE9A4FU28 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CTAGE9A4FU28 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CTAGE9A4FU28 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 AC107890.1-201ENST00000422478 521 ntBASIC15.58■□□□□ 0.08
CTAGE9A4FU28 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 VDAC1P7-201ENST00000462417 847 ntBASIC15.58■□□□□ 0.08
CTAGE9A4FU28 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 AC027369.6-201ENST00000525520 931 ntBASIC15.58■□□□□ 0.08
CTAGE9A4FU28 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 AC036164.1-201ENST00000570544 333 ntBASIC15.58■□□□□ 0.08
CTAGE9A4FU28 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 AC023511.2-201ENST00000618803 211 ntBASIC15.58■□□□□ 0.08
CTAGE9A4FU28 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 AL138725.1-201ENST00000407347 1314 ntBASIC15.58■□□□□ 0.08
CTAGE9A4FU28 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15.58■□□□□ 0.08
CTAGE9A4FU28 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 FAM86GP-201ENST00000448322 971 ntBASIC15.57■□□□□ 0.08
CTAGE9A4FU28 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 AC067863.1-201ENST00000494933 530 ntBASIC15.57■□□□□ 0.08
CTAGE9A4FU28 GIMAP3P-201ENST00000495150 836 ntBASIC15.57■□□□□ 0.08
CTAGE9A4FU28 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 KRT18P8-201ENST00000581937 1246 ntBASIC15.57■□□□□ 0.08
CTAGE9A4FU28 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 AP001160.2-201ENST00000596071 487 ntBASIC15.57■□□□□ 0.08
CTAGE9A4FU28 AL844908.2-201ENST00000609461 460 ntBASIC15.57■□□□□ 0.08
CTAGE9A4FU28 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 AP001002.3-201ENST00000623482 206 ntBASIC15.57■□□□□ 0.08
CTAGE9A4FU28 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
CTAGE9A4FU28 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms