Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 AC012044.1-201ENST00000603431 297 ntBASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 RNA5SP359-201ENST00000364838 113 ntBASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 ELK2AP-201ENST00000392510 1007 ntBASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 RN7SL258P-201ENST00000478664 300 ntBASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 AC005586.2-201ENST00000563946 837 ntBASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 AL133499.1-201ENST00000596207 608 ntBASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 AC016629.1-201ENST00000596579 586 ntBASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 AC006453.1-201ENST00000636037 1257 ntBASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLCF1Q9UBD9 AC126335.2-201ENST00000623362 4637 ntBASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.9□□□□□ -0.34
CLCF1Q9UBD9 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms