Protein–RNA interactions for Protein: Q9P2K6

KLHL42, Kelch-like protein 42, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42Q9P2K6 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 SCARNA21-201ENST00000517026 139 ntBASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 AC005730.2-201ENST00000564549 1184 ntBASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 RN7SL163P-201ENST00000583100 276 ntBASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 LINC01230-201ENST00000625222 3017 ntBASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 CCT8L1P-201ENST00000465400 1674 ntBASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KLHL42Q9P2K6 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 GK-202ENST00000378941 458 ntTSL 3 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 OR2R1P-201ENST00000441404 914 ntBASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 KRT18P8-201ENST00000581937 1246 ntBASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 AC008805.1-201ENST00000590892 364 ntBASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 AL136295.7-201ENST00000619226 1200 ntBASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 AC004923.1-202ENST00000642106 209 ntBASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
KLHL42Q9P2K6 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
KLHL42Q9P2K6 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms