Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 INGX-202ENST00000489074 768 ntBASIC13.78□□□□□ -0.2
VAPAQ9P0L0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 RNA5SP421-201ENST00000516864 134 ntBASIC13.78□□□□□ -0.2
VAPAQ9P0L0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 API5-211ENST00000534695 560 ntTSL 5 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.78□□□□□ -0.2
VAPAQ9P0L0 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 MIR497HG-202ENST00000572453 3838 ntBASIC13.78□□□□□ -0.2
VAPAQ9P0L0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
VAPAQ9P0L0 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
VAPAQ9P0L0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
VAPAQ9P0L0 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
VAPAQ9P0L0 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
VAPAQ9P0L0 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.77□□□□□ -0.2
VAPAQ9P0L0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
VAPAQ9P0L0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 RFPL4AP1-201ENST00000530883 850 ntBASIC13.77□□□□□ -0.21
VAPAQ9P0L0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 AC005586.2-201ENST00000563946 837 ntBASIC13.77□□□□□ -0.21
VAPAQ9P0L0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 AC008494.3-201ENST00000606615 944 ntBASIC13.77□□□□□ -0.21
VAPAQ9P0L0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 BAP1-211ENST00000615113 489 ntBASIC13.77□□□□□ -0.21
VAPAQ9P0L0 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
VAPAQ9P0L0 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAPAQ9P0L0 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.76□□□□□ -0.21
VAPAQ9P0L0 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VAPAQ9P0L0 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VAPAQ9P0L0 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms