Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 INE1-201ENST00000456273 945 ntBASIC14.35□□□□□ -0.11
MKS1Q9NXB0 ELK1P1-201ENST00000485699 580 ntBASIC14.35□□□□□ -0.11
MKS1Q9NXB0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 AC009118.2-201ENST00000613275 655 ntBASIC14.35□□□□□ -0.11
MKS1Q9NXB0 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MKS1Q9NXB0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 METTL21AP1-201ENST00000438852 635 ntBASIC14.34□□□□□ -0.11
MKS1Q9NXB0 AC012441.1-201ENST00000446669 685 ntBASIC14.34□□□□□ -0.11
MKS1Q9NXB0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 AC008825.2-201ENST00000603374 718 ntBASIC14.34□□□□□ -0.11
MKS1Q9NXB0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 KRT18P28-201ENST00000453838 1332 ntBASIC14.34□□□□□ -0.11
MKS1Q9NXB0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 POM121L14P-201ENST00000406100 1558 ntBASIC14.34□□□□□ -0.11
MKS1Q9NXB0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MKS1Q9NXB0 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MKS1Q9NXB0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MKS1Q9NXB0 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
MKS1Q9NXB0 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.33□□□□□ -0.11
MKS1Q9NXB0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MKS1Q9NXB0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MKS1Q9NXB0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms