Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
VRK1Q99986 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
VRK1Q99986 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
VRK1Q99986 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
VRK1Q99986 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
VRK1Q99986 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.99□□□□□ -0.33
VRK1Q99986 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.99□□□□□ -0.33
VRK1Q99986 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
VRK1Q99986 AL645937.2-201ENST00000396808 931 ntBASIC12.99□□□□□ -0.33
VRK1Q99986 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 AL139094.1-201ENST00000405549 1188 ntBASIC12.99□□□□□ -0.33
VRK1Q99986 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
VRK1Q99986 FAM8A2P-201ENST00000528813 1142 ntBASIC12.99□□□□□ -0.33
VRK1Q99986 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.99□□□□□ -0.33
VRK1Q99986 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.99□□□□□ -0.33
VRK1Q99986 RN7SL560P-201ENST00000577943 264 ntBASIC12.99□□□□□ -0.33
VRK1Q99986 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.99□□□□□ -0.33
VRK1Q99986 AC008687.7-202ENST00000637404 953 ntBASIC12.99□□□□□ -0.33
VRK1Q99986 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
VRK1Q99986 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.99□□□□□ -0.33
VRK1Q99986 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.99□□□□□ -0.33
VRK1Q99986 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 AL138709.1-201ENST00000614840 1693 ntBASIC12.99□□□□□ -0.33
VRK1Q99986 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
VRK1Q99986 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.98□□□□□ -0.33
VRK1Q99986 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
VRK1Q99986 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.98□□□□□ -0.33
VRK1Q99986 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.98□□□□□ -0.33
VRK1Q99986 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
VRK1Q99986 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.98□□□□□ -0.33
VRK1Q99986 MIR1908-201ENST00000410394 80 ntBASIC12.98□□□□□ -0.33
VRK1Q99986 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.98□□□□□ -0.33
VRK1Q99986 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.98□□□□□ -0.33
VRK1Q99986 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.98□□□□□ -0.33
VRK1Q99986 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
VRK1Q99986 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.98□□□□□ -0.33
VRK1Q99986 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.98□□□□□ -0.33
VRK1Q99986 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.98□□□□□ -0.33
VRK1Q99986 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.98□□□□□ -0.33
VRK1Q99986 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.98□□□□□ -0.33
VRK1Q99986 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.98□□□□□ -0.33
VRK1Q99986 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.98□□□□□ -0.33
VRK1Q99986 MIR4525-201ENST00000580000 75 ntBASIC12.98□□□□□ -0.33
VRK1Q99986 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.98□□□□□ -0.33
VRK1Q99986 ECM1P1-201ENST00000604092 1279 ntBASIC12.98□□□□□ -0.33
VRK1Q99986 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.98□□□□□ -0.33
VRK1Q99986 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.98□□□□□ -0.33
VRK1Q99986 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
VRK1Q99986 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.98□□□□□ -0.33
VRK1Q99986 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
VRK1Q99986 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.98□□□□□ -0.33
VRK1Q99986 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
VRK1Q99986 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VRK1Q99986 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
VRK1Q99986 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms