Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 EIF3FP3-201ENST00000434851 1086 ntBASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 RN7SL399P-201ENST00000471648 279 ntBASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 HLA-J-203ENST00000494367 1087 ntBASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 AC109322.1-201ENST00000524499 1264 ntBASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 AC140878.1-201ENST00000565277 250 ntBASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 FP325330.2-201ENST00000624219 5630 ntBASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 AC100757.3-201ENST00000622361 1406 ntBASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.8□□□□□ -0.2
NSMCE2Q96MF7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 KLF2P2-201ENST00000416807 1039 ntBASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 AC107890.1-201ENST00000422478 521 ntBASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 AC092580.3-201ENST00000430932 139 ntBASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 AP001582.1-201ENST00000525856 295 ntBASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NSMCE2Q96MF7 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 RPSAP43-201ENST00000402237 625 ntBASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NSMCE2Q96MF7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms