Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF34Q969K3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF34Q969K3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RNF34Q969K3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RNF34Q969K3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF34Q969K3 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF34Q969K3 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF34Q969K3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF34Q969K3 MIR663B-201ENST00000408361 115 ntBASIC15.27■□□□□ 0.04
RNF34Q969K3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF34Q969K3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF34Q969K3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF34Q969K3 FAM58BP-201ENST00000439056 645 ntBASIC15.27■□□□□ 0.04
RNF34Q969K3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF34Q969K3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RNF34Q969K3 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF34Q969K3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF34Q969K3 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF34Q969K3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RNF34Q969K3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RNF34Q969K3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.27■□□□□ 0.04
RNF34Q969K3 AC005730.2-201ENST00000564549 1184 ntBASIC15.27■□□□□ 0.04
RNF34Q969K3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF34Q969K3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF34Q969K3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
RNF34Q969K3 AC009884.2-201ENST00000603110 324 ntBASIC15.27■□□□□ 0.04
RNF34Q969K3 AL118558.3-201ENST00000607414 1079 ntBASIC15.27■□□□□ 0.04
RNF34Q969K3 AC005695.3-201ENST00000614522 232 ntBASIC15.27■□□□□ 0.04
RNF34Q969K3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF34Q969K3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF34Q969K3 AP001267.2-201ENST00000532619 2086 ntBASIC15.27■□□□□ 0.03
RNF34Q969K3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.27■□□□□ 0.03
RNF34Q969K3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF34Q969K3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.27■□□□□ 0.03
RNF34Q969K3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF34Q969K3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RNF34Q969K3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RNF34Q969K3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF34Q969K3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.27■□□□□ 0.03
RNF34Q969K3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.27■□□□□ 0.03
RNF34Q969K3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF34Q969K3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF34Q969K3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
RNF34Q969K3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF34Q969K3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF34Q969K3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RNF34Q969K3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF34Q969K3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF34Q969K3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RNF34Q969K3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.26■□□□□ 0.03
RNF34Q969K3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 KRT8P29-201ENST00000420409 1371 ntBASIC15.26■□□□□ 0.03
RNF34Q969K3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RNF34Q969K3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RNF34Q969K3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RNF34Q969K3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.26■□□□□ 0.03
RNF34Q969K3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF34Q969K3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF34Q969K3 POM121L10P-201ENST00000436994 1285 ntBASIC15.26■□□□□ 0.03
RNF34Q969K3 AC012441.2-201ENST00000444843 739 ntBASIC15.26■□□□□ 0.03
RNF34Q969K3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF34Q969K3 RNMTL1P1-201ENST00000454103 560 ntBASIC15.26■□□□□ 0.03
RNF34Q969K3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF34Q969K3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF34Q969K3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
RNF34Q969K3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF34Q969K3 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.26■□□□□ 0.03
RNF34Q969K3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
RNF34Q969K3 AL162426.1-201ENST00000624141 743 ntBASIC15.26■□□□□ 0.03
RNF34Q969K3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.26■□□□□ 0.03
RNF34Q969K3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 AL590440.2-201ENST00000641973 1595 ntBASIC15.26■□□□□ 0.03
RNF34Q969K3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RNF34Q969K3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF34Q969K3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF34Q969K3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.26■□□□□ 0.03
RNF34Q969K3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF34Q969K3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF34Q969K3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF34Q969K3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF34Q969K3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RNF34Q969K3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms