Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.17□□□□□ -0.3
APH1BQ8WW43 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
APH1BQ8WW43 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APH1BQ8WW43 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APH1BQ8WW43 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 BTBD7P1-201ENST00000447253 1453 ntBASIC13.16□□□□□ -0.3
APH1BQ8WW43 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.16□□□□□ -0.3
APH1BQ8WW43 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.16□□□□□ -0.3
APH1BQ8WW43 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.16□□□□□ -0.3
APH1BQ8WW43 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 AC069120.2-201ENST00000524091 540 ntBASIC13.16□□□□□ -0.3
APH1BQ8WW43 AC109322.1-201ENST00000524499 1264 ntBASIC13.16□□□□□ -0.3
APH1BQ8WW43 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 BX088702.1-201ENST00000610784 235 ntBASIC13.16□□□□□ -0.3
APH1BQ8WW43 AC004790.1-201ENST00000612686 536 ntBASIC13.16□□□□□ -0.3
APH1BQ8WW43 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 ABCD1P2-201ENST00000429313 1601 ntBASIC13.16□□□□□ -0.3
APH1BQ8WW43 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APH1BQ8WW43 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 AC115284.2-201ENST00000624646 2054 ntBASIC13.16□□□□□ -0.3
APH1BQ8WW43 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
APH1BQ8WW43 AC026271.4-201ENST00000578214 1833 ntBASIC13.16□□□□□ -0.3
APH1BQ8WW43 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 AC073869.1-201ENST00000415574 2762 ntBASIC13.15□□□□□ -0.3
APH1BQ8WW43 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 INTS4P2-202ENST00000614726 2019 ntBASIC13.15□□□□□ -0.3
APH1BQ8WW43 AC100757.3-201ENST00000622361 1406 ntBASIC13.15□□□□□ -0.3
APH1BQ8WW43 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 LRRC59-203ENST00000576448 1531 ntBASIC13.15□□□□□ -0.3
APH1BQ8WW43 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
APH1BQ8WW43 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.15□□□□□ -0.3
APH1BQ8WW43 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 AC125807.1-201ENST00000483097 614 ntBASIC13.15□□□□□ -0.3
APH1BQ8WW43 RPL13AP25-201ENST00000484130 612 ntBASIC13.15□□□□□ -0.3
APH1BQ8WW43 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 AC120045.2-201ENST00000567334 178 ntBASIC13.15□□□□□ -0.3
APH1BQ8WW43 AC009407.1-201ENST00000568958 598 ntBASIC13.15□□□□□ -0.3
APH1BQ8WW43 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 AC027612.4-201ENST00000605371 583 ntBASIC13.15□□□□□ -0.3
APH1BQ8WW43 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
APH1BQ8WW43 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms