Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 AL138709.1-201ENST00000614840 1693 ntBASIC14.34□□□□□ -0.11
RDH11Q8TC12 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.34□□□□□ -0.11
RDH11Q8TC12 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.34□□□□□ -0.11
RDH11Q8TC12 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.34□□□□□ -0.11
RDH11Q8TC12 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RDH11Q8TC12 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.34□□□□□ -0.11
RDH11Q8TC12 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.34□□□□□ -0.11
RDH11Q8TC12 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.34□□□□□ -0.11
RDH11Q8TC12 AL035414.1-201ENST00000451327 857 ntBASIC14.34□□□□□ -0.11
RDH11Q8TC12 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.34□□□□□ -0.11
RDH11Q8TC12 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.34□□□□□ -0.11
RDH11Q8TC12 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.34□□□□□ -0.11
RDH11Q8TC12 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RDH11Q8TC12 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
RDH11Q8TC12 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.34□□□□□ -0.11
RDH11Q8TC12 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RDH11Q8TC12 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RDH11Q8TC12 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RDH11Q8TC12 AC009093.2-202ENST00000620513 2079 ntBASIC14.34□□□□□ -0.11
RDH11Q8TC12 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RDH11Q8TC12 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RDH11Q8TC12 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RDH11Q8TC12 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RDH11Q8TC12 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RDH11Q8TC12 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RDH11Q8TC12 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RDH11Q8TC12 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
RDH11Q8TC12 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RDH11Q8TC12 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RDH11Q8TC12 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RDH11Q8TC12 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RDH11Q8TC12 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RDH11Q8TC12 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RDH11Q8TC12 BAATP1-201ENST00000412284 1225 ntBASIC14.33□□□□□ -0.12
RDH11Q8TC12 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 COX20P2-201ENST00000452636 358 ntBASIC14.33□□□□□ -0.12
RDH11Q8TC12 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RDH11Q8TC12 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RDH11Q8TC12 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 AC106820.3-201ENST00000561653 397 ntBASIC14.33□□□□□ -0.12
RDH11Q8TC12 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RDH11Q8TC12 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 AC068760.1-201ENST00000493579 1953 ntBASIC14.33□□□□□ -0.12
RDH11Q8TC12 C8orf49-201ENST00000525043 1968 ntBASIC14.33□□□□□ -0.12
RDH11Q8TC12 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RDH11Q8TC12 CICP8-201ENST00000455800 2813 ntBASIC14.33□□□□□ -0.12
RDH11Q8TC12 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RDH11Q8TC12 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms