Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 INTS4P2-202ENST00000614726 2019 ntBASIC15.12■□□□□ 0.01
CCDC25Q86WR0 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 EIF3FP3-201ENST00000434851 1086 ntBASIC15.12■□□□□ 0.01
CCDC25Q86WR0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 AC120045.2-201ENST00000567334 178 ntBASIC15.12■□□□□ 0.01
CCDC25Q86WR0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 AC138761.1-201ENST00000584393 385 ntBASIC15.12■□□□□ 0.01
CCDC25Q86WR0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 AC093028.1-201ENST00000622998 982 ntBASIC15.12■□□□□ 0.01
CCDC25Q86WR0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 LINC02486-201ENST00000604157 3000 ntBASIC15.12■□□□□ 0.01
CCDC25Q86WR0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC25Q86WR0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 KLF2P2-201ENST00000416807 1039 ntBASIC15.11■□□□□ 0.01
CCDC25Q86WR0 AC134915.1-201ENST00000426461 574 ntBASIC15.11■□□□□ 0.01
CCDC25Q86WR0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 AC015911.4-201ENST00000588022 1070 ntBASIC15.11■□□□□ 0.01
CCDC25Q86WR0 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC25Q86WR0 AC072061.1-201ENST00000569710 2234 ntBASIC15.11■□□□□ 0.01
CCDC25Q86WR0 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC25Q86WR0 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC25Q86WR0 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms