Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 AC092474.2-201ENST00000424288 719 ntBASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 AL591424.1-201ENST00000442569 1213 ntBASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 MIR6074-201ENST00000612054 107 ntBASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 AC145098.2-201ENST00000623593 3026 ntBASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
KCNIP4Q6PIL6 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
KCNIP4Q6PIL6 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.59
KCNIP4Q6PIL6 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.59
KCNIP4Q6PIL6 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
KCNIP4Q6PIL6 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 NPTN-IT1-201ENST00000628401 2283 ntBASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 MRPL3P1-201ENST00000400109 1033 ntBASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 AL590627.1-203ENST00000421194 1026 ntBASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 AC104692.2-201ENST00000603054 253 ntBASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 AC026979.3-201ENST00000607315 403 ntBASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.33□□□□□ -0.6
KCNIP4Q6PIL6 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms