Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 AGAP10P-201ENST00000454844 2418 ntBASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 GOLGA2P4-201ENST00000441462 777 ntBASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 ATP5G2P4-201ENST00000442175 420 ntBASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 Z93015.1-201ENST00000451718 390 ntBASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 FAM86HP-204ENST00000513466 959 ntBASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 RN7SL560P-201ENST00000577943 264 ntBASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 AL096828.3-201ENST00000615354 462 ntBASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 LAP3P2-201ENST00000454686 1454 ntBASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CREB3L3Q68CJ9 AC023794.5-201ENST00000564380 2157 ntBASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 USP17L6P-201ENST00000382470 1197 ntBASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 AC124068.2-201ENST00000569473 1109 ntBASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CREB3L3Q68CJ9 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 AC111170.3-201ENST00000624282 2464 ntBASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 KRT18P36-201ENST00000411618 1276 ntBASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CREB3L3Q68CJ9 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms