Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 AL035252.4-201ENST00000624174 288 ntBASIC17.4■□□□□ 0.38
RNF20Q5VTR2 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 KRT8P24-201ENST00000560290 1559 ntBASIC17.4■□□□□ 0.38
RNF20Q5VTR2 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF20Q5VTR2 CICP16-201ENST00000502609 2813 ntBASIC17.39■□□□□ 0.38
RNF20Q5VTR2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 AL023775.1-201ENST00000454907 1746 ntBASIC17.39■□□□□ 0.37
RNF20Q5VTR2 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 MIR1909-201ENST00000411312 80 ntBASIC17.39■□□□□ 0.37
RNF20Q5VTR2 AC100850.1-201ENST00000506768 649 ntBASIC17.39■□□□□ 0.37
RNF20Q5VTR2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF20Q5VTR2 E2F3P2-201ENST00000447755 1422 ntBASIC17.38■□□□□ 0.37
RNF20Q5VTR2 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 GPR53P-205ENST00000457298 1084 ntBASIC17.38■□□□□ 0.37
RNF20Q5VTR2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 MIR6720-201ENST00000611664 98 ntBASIC17.38■□□□□ 0.37
RNF20Q5VTR2 AC244157.2-201ENST00000616239 1006 ntBASIC17.38■□□□□ 0.37
RNF20Q5VTR2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF20Q5VTR2 AC041040.2-201ENST00000622926 2899 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms