Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC27Q2M243 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC27Q2M243 AKR7A2P1-201ENST00000460134 915 ntBASIC18.79■□□□□ 0.6
CCDC27Q2M243 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC27Q2M243 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC27Q2M243 AL805961.1-203ENST00000641078 1258 ntBASIC18.79■□□□□ 0.6
CCDC27Q2M243 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC27Q2M243 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC27Q2M243 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CCDC27Q2M243 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC27Q2M243 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC27Q2M243 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC27Q2M243 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.78■□□□□ 0.6
CCDC27Q2M243 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC27Q2M243 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC27Q2M243 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC27Q2M243 AC011742.3-201ENST00000439053 820 ntBASIC18.78■□□□□ 0.6
CCDC27Q2M243 SCARNA20.5-201ENST00000516991 142 ntBASIC18.78■□□□□ 0.6
CCDC27Q2M243 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC27Q2M243 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC27Q2M243 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC27Q2M243 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCDC27Q2M243 AC020914.3-201ENST00000594712 304 ntBASIC18.78■□□□□ 0.6
CCDC27Q2M243 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC27Q2M243 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 AL022334.2-201ENST00000610000 484 ntBASIC18.78■□□□□ 0.6
CCDC27Q2M243 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC27Q2M243 AC244452.3-201ENST00000636814 210 ntBASIC18.78■□□□□ 0.6
CCDC27Q2M243 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC27Q2M243 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC27Q2M243 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC27Q2M243 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
CCDC27Q2M243 AL136379.1-201ENST00000623471 2642 ntBASIC18.78■□□□□ 0.6
CCDC27Q2M243 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC27Q2M243 LINC01230-201ENST00000625222 3017 ntBASIC18.78■□□□□ 0.6
CCDC27Q2M243 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC27Q2M243 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCDC27Q2M243 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC27Q2M243 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC27Q2M243 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC27Q2M243 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC27Q2M243 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC27Q2M243 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC27Q2M243 AL596276.2-201ENST00000447525 331 ntBASIC18.77■□□□□ 0.6
CCDC27Q2M243 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 EIF4HP1-201ENST00000453115 687 ntBASIC18.77■□□□□ 0.6
CCDC27Q2M243 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC27Q2M243 RHEB-207ENST00000496004 744 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC27Q2M243 MAX-218ENST00000557746 571 ntTSL 4 BASIC18.77■□□□□ 0.6
CCDC27Q2M243 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC27Q2M243 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC27Q2M243 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC27Q2M243 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCDC27Q2M243 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC27Q2M243 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCDC27Q2M243 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CCDC27Q2M243 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CCDC27Q2M243 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC27Q2M243 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC27Q2M243 AC067930.6-201ENST00000623257 4947 ntBASIC18.77■□□□□ 0.59
CCDC27Q2M243 RPL13AP3-202ENST00000494676 1473 ntBASIC18.77■□□□□ 0.59
CCDC27Q2M243 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC27Q2M243 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC18.77■□□□□ 0.59
CCDC27Q2M243 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC27Q2M243 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms