Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.94□□□□□ -0.18
RSPO4Q2I0M5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 AP000244.1-201ENST00000424582 201 ntBASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 RN7SL173P-201ENST00000461853 292 ntBASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 ALG1L15P-201ENST00000482834 794 ntBASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 NF1P11-201ENST00000621292 1282 ntBASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 AC136621.1-201ENST00000624017 2304 ntBASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 AL591122.2-201ENST00000624125 1853 ntBASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO4Q2I0M5 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 AC013268.4-201ENST00000637413 2228 ntBASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 AC013726.1-201ENST00000563747 2285 ntBASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 STK24P1-201ENST00000455035 1291 ntBASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 TPT1P6-201ENST00000458298 514 ntBASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 ISL1-203ENST00000511384 981 ntTSL 5 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 AC095040.1-201ENST00000513286 675 ntBASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 RN7SL524P-201ENST00000581152 300 ntBASIC13.92□□□□□ -0.18
RSPO4Q2I0M5 ACTBP9-201ENST00000587663 1099 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms