Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.52□□□□□ -0.41
ABCA4P78363 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA4P78363 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA4P78363 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA4P78363 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA4P78363 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA4P78363 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.52□□□□□ -0.41
ABCA4P78363 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.52□□□□□ -0.41
ABCA4P78363 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.52□□□□□ -0.41
ABCA4P78363 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.52□□□□□ -0.41
ABCA4P78363 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA4P78363 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA4P78363 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA4P78363 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.52□□□□□ -0.41
ABCA4P78363 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA4P78363 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA4P78363 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA4P78363 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA4P78363 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA4P78363 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.51□□□□□ -0.41
ABCA4P78363 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 RPL18AP3-201ENST00000462885 528 ntBASIC12.51□□□□□ -0.41
ABCA4P78363 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
ABCA4P78363 AC026410.1-201ENST00000507366 1101 ntBASIC12.51□□□□□ -0.41
ABCA4P78363 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC12.51□□□□□ -0.41
ABCA4P78363 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC12.51□□□□□ -0.41
ABCA4P78363 MIR6720-201ENST00000611664 98 ntBASIC12.51□□□□□ -0.41
ABCA4P78363 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.51□□□□□ -0.41
ABCA4P78363 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC12.51□□□□□ -0.41
ABCA4P78363 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA4P78363 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA4P78363 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.51□□□□□ -0.41
ABCA4P78363 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA4P78363 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA4P78363 KRT17P5-201ENST00000332088 839 ntBASIC12.51□□□□□ -0.41
ABCA4P78363 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.51□□□□□ -0.41
ABCA4P78363 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA4P78363 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.51□□□□□ -0.41
ABCA4P78363 AP003398.1-201ENST00000531124 318 ntBASIC12.51□□□□□ -0.41
ABCA4P78363 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.51□□□□□ -0.41
ABCA4P78363 AC009560.1-201ENST00000620208 434 ntBASIC12.51□□□□□ -0.41
ABCA4P78363 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.51□□□□□ -0.41
ABCA4P78363 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA4P78363 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ABCA4P78363 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.51□□□□□ -0.41
ABCA4P78363 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ABCA4P78363 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.51□□□□□ -0.41
ABCA4P78363 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
ABCA4P78363 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA4P78363 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.51□□□□□ -0.41
ABCA4P78363 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ABCA4P78363 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 RNA5SP359-201ENST00000364838 113 ntBASIC12.5□□□□□ -0.41
ABCA4P78363 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.5□□□□□ -0.41
ABCA4P78363 DDX39AP1-201ENST00000445147 1181 ntBASIC12.5□□□□□ -0.41
ABCA4P78363 AL354861.1-201ENST00000445213 355 ntBASIC12.5□□□□□ -0.41
ABCA4P78363 LYPLA2P1-203ENST00000447689 696 ntBASIC12.5□□□□□ -0.41
ABCA4P78363 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.5□□□□□ -0.41
ABCA4P78363 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.5□□□□□ -0.41
ABCA4P78363 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.5□□□□□ -0.41
ABCA4P78363 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.5□□□□□ -0.41
ABCA4P78363 AC084781.1-201ENST00000613737 656 ntBASIC12.5□□□□□ -0.41
ABCA4P78363 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.5□□□□□ -0.41
ABCA4P78363 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ABCA4P78363 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms