Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.77□□□□□ -0.2
RPS3AP61247 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
RPS3AP61247 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
RPS3AP61247 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
RPS3AP61247 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.77□□□□□ -0.21
RPS3AP61247 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RPS3AP61247 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.77□□□□□ -0.21
RPS3AP61247 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RPS3AP61247 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RPS3AP61247 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RPS3AP61247 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.77□□□□□ -0.21
RPS3AP61247 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.77□□□□□ -0.21
RPS3AP61247 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RPS3AP61247 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.77□□□□□ -0.21
RPS3AP61247 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.77□□□□□ -0.21
RPS3AP61247 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.77□□□□□ -0.21
RPS3AP61247 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RPS3AP61247 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.77□□□□□ -0.21
RPS3AP61247 C2orf27AP3-201ENST00000434123 579 ntBASIC13.77□□□□□ -0.21
RPS3AP61247 U91328.1-201ENST00000437528 223 ntBASIC13.77□□□□□ -0.21
RPS3AP61247 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.77□□□□□ -0.21
RPS3AP61247 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.77□□□□□ -0.21
RPS3AP61247 KRT8P35-201ENST00000483942 1338 ntBASIC13.77□□□□□ -0.21
RPS3AP61247 USP32P1-208ENST00000506594 1164 ntBASIC13.77□□□□□ -0.21
RPS3AP61247 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.77□□□□□ -0.21
RPS3AP61247 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.77□□□□□ -0.21
RPS3AP61247 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.77□□□□□ -0.21
RPS3AP61247 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.77□□□□□ -0.21
RPS3AP61247 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.77□□□□□ -0.21
RPS3AP61247 AC007787.1-201ENST00000588095 1583 ntBASIC13.77□□□□□ -0.21
RPS3AP61247 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.77□□□□□ -0.21
RPS3AP61247 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.77□□□□□ -0.21
RPS3AP61247 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.77□□□□□ -0.21
RPS3AP61247 AC017083.2-201ENST00000608069 979 ntBASIC13.77□□□□□ -0.21
RPS3AP61247 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.77□□□□□ -0.21
RPS3AP61247 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 AL354718.3-201ENST00000616414 581 ntBASIC13.77□□□□□ -0.21
RPS3AP61247 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 CR382287.1-201ENST00000623954 586 ntBASIC13.77□□□□□ -0.21
RPS3AP61247 AC093525.8-201ENST00000624099 1342 ntBASIC13.77□□□□□ -0.21
RPS3AP61247 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.77□□□□□ -0.21
RPS3AP61247 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.77□□□□□ -0.21
RPS3AP61247 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPS3AP61247 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.76□□□□□ -0.21
RPS3AP61247 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.76□□□□□ -0.21
RPS3AP61247 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
RPS3AP61247 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.76□□□□□ -0.21
RPS3AP61247 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.76□□□□□ -0.21
RPS3AP61247 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.76□□□□□ -0.21
RPS3AP61247 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 BCRP2-202ENST00000447763 634 ntBASIC13.76□□□□□ -0.21
RPS3AP61247 BCRP6-201ENST00000510112 632 ntBASIC13.76□□□□□ -0.21
RPS3AP61247 BCRP7-201ENST00000511549 544 ntBASIC13.76□□□□□ -0.21
RPS3AP61247 AP001889.1-201ENST00000525414 633 ntBASIC13.76□□□□□ -0.21
RPS3AP61247 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.76□□□□□ -0.21
RPS3AP61247 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.76□□□□□ -0.21
RPS3AP61247 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.76□□□□□ -0.21
RPS3AP61247 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.76□□□□□ -0.21
RPS3AP61247 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.76□□□□□ -0.21
RPS3AP61247 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.76□□□□□ -0.21
RPS3AP61247 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.76□□□□□ -0.21
RPS3AP61247 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RPS3AP61247 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.76□□□□□ -0.21
RPS3AP61247 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RPS3AP61247 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPS3AP61247 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms