Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.6□□□□□ -0.23
PER3P56645 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PER3P56645 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.6□□□□□ -0.23
PER3P56645 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 AL139094.1-201ENST00000405549 1188 ntBASIC13.6□□□□□ -0.23
PER3P56645 AC007274.2-201ENST00000421675 662 ntBASIC13.6□□□□□ -0.23
PER3P56645 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.6□□□□□ -0.23
PER3P56645 NKAIN1P1-201ENST00000435754 582 ntBASIC13.6□□□□□ -0.23
PER3P56645 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.6□□□□□ -0.23
PER3P56645 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 AC008267.1-201ENST00000474858 1069 ntBASIC13.6□□□□□ -0.23
PER3P56645 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.6□□□□□ -0.23
PER3P56645 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.6□□□□□ -0.23
PER3P56645 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.6□□□□□ -0.23
PER3P56645 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.6□□□□□ -0.23
PER3P56645 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.6□□□□□ -0.23
PER3P56645 MIR3907-201ENST00000579424 151 ntBASIC13.6□□□□□ -0.23
PER3P56645 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.6□□□□□ -0.23
PER3P56645 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
PER3P56645 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PER3P56645 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PER3P56645 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
PER3P56645 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.6□□□□□ -0.23
PER3P56645 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 AC112693.3-201ENST00000624819 1983 ntBASIC13.6□□□□□ -0.23
PER3P56645 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
PER3P56645 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.59□□□□□ -0.23
PER3P56645 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.59□□□□□ -0.23
PER3P56645 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.59□□□□□ -0.23
PER3P56645 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.59□□□□□ -0.23
PER3P56645 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.59□□□□□ -0.23
PER3P56645 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.59□□□□□ -0.23
PER3P56645 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.59□□□□□ -0.23
PER3P56645 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PER3P56645 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.59□□□□□ -0.23
PER3P56645 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.59□□□□□ -0.23
PER3P56645 EEF1DP6-201ENST00000449232 372 ntBASIC13.59□□□□□ -0.23
PER3P56645 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.59□□□□□ -0.23
PER3P56645 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.59□□□□□ -0.23
PER3P56645 AC134698.3-201ENST00000523880 214 ntBASIC13.59□□□□□ -0.23
PER3P56645 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PER3P56645 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.59□□□□□ -0.23
PER3P56645 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.59□□□□□ -0.23
PER3P56645 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.59□□□□□ -0.23
PER3P56645 RN7SL713P-201ENST00000582127 302 ntBASIC13.59□□□□□ -0.23
PER3P56645 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.59□□□□□ -0.23
PER3P56645 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PER3P56645 AC079336.7-201ENST00000623428 1078 ntBASIC13.59□□□□□ -0.23
PER3P56645 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.59□□□□□ -0.23
PER3P56645 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PER3P56645 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
PER3P56645 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.59□□□□□ -0.23
PER3P56645 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.59□□□□□ -0.23
PER3P56645 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.59□□□□□ -0.23
PER3P56645 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.59□□□□□ -0.23
PER3P56645 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
PER3P56645 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms