Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 AC099063.4-201ENST00000641099 1602 ntBASIC12.72□□□□□ -0.37
FOXG1P55316 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
FOXG1P55316 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 KRT8P21-201ENST00000430398 1491 ntBASIC12.72□□□□□ -0.37
FOXG1P55316 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
FOXG1P55316 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.72□□□□□ -0.37
FOXG1P55316 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
FOXG1P55316 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
FOXG1P55316 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
FOXG1P55316 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
FOXG1P55316 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
FOXG1P55316 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.71□□□□□ -0.37
FOXG1P55316 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
FOXG1P55316 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
FOXG1P55316 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.71□□□□□ -0.37
FOXG1P55316 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.71□□□□□ -0.37
FOXG1P55316 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
FOXG1P55316 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.71□□□□□ -0.37
FOXG1P55316 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
FOXG1P55316 AC064801.2-201ENST00000625052 1303 ntBASIC12.71□□□□□ -0.37
FOXG1P55316 C8orf49-201ENST00000525043 1968 ntBASIC12.71□□□□□ -0.37
FOXG1P55316 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
FOXG1P55316 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
FOXG1P55316 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.71□□□□□ -0.37
FOXG1P55316 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.71□□□□□ -0.37
FOXG1P55316 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.71□□□□□ -0.37
FOXG1P55316 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.71□□□□□ -0.37
FOXG1P55316 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.71□□□□□ -0.37
FOXG1P55316 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.71□□□□□ -0.37
FOXG1P55316 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
FOXG1P55316 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.71□□□□□ -0.37
FOXG1P55316 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.71□□□□□ -0.37
FOXG1P55316 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.71□□□□□ -0.37
FOXG1P55316 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.71□□□□□ -0.37
FOXG1P55316 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
FOXG1P55316 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.71□□□□□ -0.37
FOXG1P55316 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
FOXG1P55316 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
FOXG1P55316 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
FOXG1P55316 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
FOXG1P55316 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.71□□□□□ -0.37
FOXG1P55316 AC027601.5-201ENST00000624065 2482 ntBASIC12.71□□□□□ -0.37
FOXG1P55316 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
FOXG1P55316 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.71□□□□□ -0.38
FOXG1P55316 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
FOXG1P55316 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
FOXG1P55316 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
FOXG1P55316 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.71□□□□□ -0.38
FOXG1P55316 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
FOXG1P55316 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
FOXG1P55316 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
FOXG1P55316 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
FOXG1P55316 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
FOXG1P55316 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.71□□□□□ -0.38
FOXG1P55316 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
FOXG1P55316 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
FOXG1P55316 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
FOXG1P55316 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
FOXG1P55316 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
FOXG1P55316 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
FOXG1P55316 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
FOXG1P55316 LINC01165-201ENST00000445190 1623 ntBASIC12.7□□□□□ -0.38
FOXG1P55316 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
FOXG1P55316 AP002353.1-201ENST00000528257 1599 ntBASIC12.7□□□□□ -0.38
FOXG1P55316 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
FOXG1P55316 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
FOXG1P55316 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.7□□□□□ -0.38
FOXG1P55316 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
FOXG1P55316 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
FOXG1P55316 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.7□□□□□ -0.38
FOXG1P55316 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms