Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN4P51793 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLCN4P51793 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.19■□□□□ 0.02
CLCN4P51793 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC15.19■□□□□ 0.02
CLCN4P51793 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.19■□□□□ 0.02
CLCN4P51793 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN4P51793 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.19■□□□□ 0.02
CLCN4P51793 AC140658.4-201ENST00000561990 352 ntBASIC15.19■□□□□ 0.02
CLCN4P51793 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN4P51793 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN4P51793 AC021016.3-201ENST00000608367 477 ntBASIC15.19■□□□□ 0.02
CLCN4P51793 AC009145.4-201ENST00000625119 1294 ntBASIC15.19■□□□□ 0.02
CLCN4P51793 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLCN4P51793 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CLCN4P51793 FGD5P1-202ENST00000614866 2498 ntBASIC15.19■□□□□ 0.02
CLCN4P51793 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLCN4P51793 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLCN4P51793 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN4P51793 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.19■□□□□ 0.02
CLCN4P51793 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CLCN4P51793 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CLCN4P51793 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.18■□□□□ 0.02
CLCN4P51793 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.18■□□□□ 0.02
CLCN4P51793 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.18■□□□□ 0.02
CLCN4P51793 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLCN4P51793 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CLCN4P51793 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
CLCN4P51793 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.18■□□□□ 0.02
CLCN4P51793 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.18■□□□□ 0.02
CLCN4P51793 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CLCN4P51793 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CLCN4P51793 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC15.18■□□□□ 0.02
CLCN4P51793 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC15.18■□□□□ 0.02
CLCN4P51793 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.18■□□□□ 0.02
CLCN4P51793 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CLCN4P51793 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.18■□□□□ 0.02
CLCN4P51793 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.18■□□□□ 0.02
CLCN4P51793 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLCN4P51793 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 AC141586.1-203ENST00000567242 366 ntBASIC15.18■□□□□ 0.02
CLCN4P51793 AC007952.4-201ENST00000573866 637 ntBASIC15.18■□□□□ 0.02
CLCN4P51793 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.18■□□□□ 0.02
CLCN4P51793 MIR5196-201ENST00000578146 115 ntBASIC15.18■□□□□ 0.02
CLCN4P51793 RN7SL665P-201ENST00000578793 300 ntBASIC15.18■□□□□ 0.02
CLCN4P51793 AC138466.5-201ENST00000624002 808 ntBASIC15.18■□□□□ 0.02
CLCN4P51793 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CLCN4P51793 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.18■□□□□ 0.02
CLCN4P51793 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.18■□□□□ 0.02
CLCN4P51793 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
CLCN4P51793 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
CLCN4P51793 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CLCN4P51793 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CLCN4P51793 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLCN4P51793 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN4P51793 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN4P51793 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN4P51793 AC006372.4-201ENST00000624122 1543 ntBASIC15.17■□□□□ 0.02
CLCN4P51793 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN4P51793 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CLCN4P51793 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN4P51793 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN4P51793 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCN4P51793 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms